RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 STXBP1P61764 594 aaKnown RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 SLC18A2Q05940 514 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 DEFB134Q4QY38 66 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 TOR1AIP1Q5JTV8 583 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 ADNP2Q6IQ32 1131 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 PPP1R32Q7Z5V6 425 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 LAPTM4BQ86VI4 370 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 APLFQ8IW19 511 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 L3MBTL4Q8NA19 623 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 OR7G3Q8NG95 312 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 OR51Q1Q8NH59 317 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 CCT6BQ92526 530 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 NOL11Q9H8H0 719 aaKnown RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 CLK4Q9HAZ1 481 aaKnown RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 ZBTB26Q9HCK0 441 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 SEMA3GQ9NS98 782 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 C14orf105Q9NVL8 296 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 EMCNQ9ULC0 261 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 TSC22D4Q9Y3Q8 395 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 COPEO14579 308 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 OR7A17O14581 309 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 RDH16O75452 317 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 BMP10O95393 424 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 CLDN9O95484 217 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 RPS17P08708 135 aaKnown RBP18.86■□□□□ 0.61
COL9A3-202ENST00000452372 HNRNPH1P31943 449 aaKnown RBP18.86■□□□□ 0.61
COL9A3-202ENST00000452372 CASRP41180 1078 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 RAB8AP61006 207 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ATP1A4Q13733 1029 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ADPRMQ3LIE5 342 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 MRGPREQ86SM8 312 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 TRABD2AQ86V40 505 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 SLC22A9Q8IVM8 553 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ZC3H7AQ8IWR0 971 aaKnown RBP18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ZNF473Q8WTR7 871 aaKnown RBP18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ATP6V1E2Q96A05 226 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 MS4A6EQ96DS6 147 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 CRB3Q9BUF7 120 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 NTMT1Q9BV86 223 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 ADGRE2Q9UHX3 823 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 C3orf18Q9UK00 162 aa18.86■□□□□ 0.61
COL9A3-202ENST00000452372 RP1L1Q8IWN7 2480 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 H0YIV9 168 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 PEX12O00623 359 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 B3GALT4O96024 378 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 PROCP04070 461 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 IMPDH1P20839 514 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 SERPINB1P30740 379 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 CCNG1P51959 295 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 HERVK_113P63132 956 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 CCDC153Q494R4 210 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 MED25Q71SY5 747 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 MYLK4Q86YV6 388 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 PRSS58Q8IYP2 241 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 C4orf33Q8N1A6 199 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 TMEM102Q8N9M5 508 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 OR52B6Q8NGF0 335 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 ZNF483Q8TF39 744 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 GAL3ST3Q96A11 431 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 NSUN5Q96P11 429 aaKnown RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 ERVK-6Q9BXR3 956 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 REXO4Q9GZR2 422 aaKnown RBP18.85■□□□□ 0.61
COL9A3-202ENST00000452372 P4HTMQ9NXG6 502 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 HCN3Q9P1Z3 774 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 ANAPC2Q9UJX6 822 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 RNF11Q9Y3C5 154 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 PCDHGA11Q9Y5H2 935 aa18.85■□□□□ 0.61
COL9A3-202ENST00000452372 PCSK5Q92824 1860 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 ZNF860A6NHJ4 632 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 ARGFXA6NJG6 315 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 IDSB3KWA1 339 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 C4orf51C9J302 202 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 G3V2L1 256 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 PLIN3O60664 434 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 PCNAP12004 261 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 NR1D1P20393 614 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 IL10P22301 178 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 XCR1P46094 333 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 PRKAA2P54646 552 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 EMP2P54851 167 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 RRADP55042 308 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 IGFBP7Q16270 282 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 UNC50Q53HI1 259 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 COLEC12Q5KU26 742 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 ZNF678Q5SXM1 525 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 IQCKQ8N0W5 287 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 SHISA5Q8N114 240 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 OR2L5Q8NG80 312 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 OR5T3Q8NGG3 340 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 REPS1Q96D71 796 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 FAR2Q96K12 515 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 MS4A8Q9BY19 250 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 ING2Q9H160 280 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 SEMA4BQ9NPR2 832 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-202ENST00000452372 TP53TG5Q9Y2B4 290 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 HS3ST3B1Q9Y662 390 aa18.84■□□□□ 0.61
COL9A3-202ENST00000452372 USP9XQ93008 2570 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-202ENST00000452372 PRRC2CQ9Y520 2896 aaKnown RBP18.83■□□□□ 0.61
COL9A3-202ENST00000452372 TNRC6AQ8NDV7 1962 aaKnown RBP18.83■□□□□ 0.61
COL9A3-202ENST00000452372 AGPSO00116 658 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms