RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 HEATR4Q86WZ0 1026 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 FAM47BQ8NA70 645 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 STARD8Q92502 1023 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 REPS1Q96D71 796 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 SLC47A1Q96FL8 570 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 TSC22D3Q99576 134 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 EFCAB11Q9BUY7 163 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 SMPD3Q9NY59 655 aaPredicted RBP10.28□□□□□ -0.76
PKP4-206ENST00000452162 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 ERVK-11Q9UQG0 969 aa10.28□□□□□ -0.76
PKP4-206ENST00000452162 POM121BA6NF01 834 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 FOXE1O00358 373 aaPredicted RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 FPGTO14772 594 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 PRKD3O94806 890 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 C1QCP02747 245 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 LAMP1P11279 417 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 MYCLP1P12525 358 aaPredicted RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 ZNF23P17027 643 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 ENGP17813 658 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 IL1RNP18510 177 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 NELFEP18615 380 aaKnown RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 CD38P28907 300 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 TIA1P31483 386 aaKnown RBP eCLIP10.27□□□□□ -0.779e-7■■□□□ 14.5
PKP4-206ENST00000452162 ASMTP46597 345 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 CDK3Q00526 305 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 RPA4Q13156 261 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 CNPY1Q3B7I2 92 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 C10orf62Q5T681 223 aaPredicted RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 TMEM214Q6NUQ4 689 aaKnown RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 DOK6Q6PKX4 331 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 RABEPKQ7Z6M1 372 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 SERPINA11Q86U17 422 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 OXR1Q8N573 874 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 OR2I1PQ8NGU4 316 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 NETO1Q8TDF5 533 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 TMBIM1Q969X1 311 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 MAGIXQ9H6Y5 334 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 MBNL1Q9NR56 388 aaKnown RBP10.27□□□□□ -0.77
PKP4-206ENST00000452162 SIRT5Q9NXA8 310 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 NDUFA13Q9P0J0 144 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 SLC23A2Q9UGH3 650 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 BTBD3Q9Y2F9 522 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 MYRFQ9Y2G1 1151 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 PRKAB1Q9Y478 270 aa10.27□□□□□ -0.77
PKP4-206ENST00000452162 PIPSLA2A3N6 862 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 PCCBP05166 539 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ANXA4P09525 319 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 ATP6V1B1P15313 513 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 AKT2P31751 481 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CAPGP40121 348 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CYBRD1Q53TN4 286 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 GALNT18Q6P9A2 607 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 NXPE4Q6UWF7 544 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 FKBP9P1Q75LS8 142 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CLECL1Q8IZS7 167 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 GPR156Q8NFN8 814 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SLC5A11Q8WWX8 675 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ASB12Q8WXK4 309 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 NCSTNQ92542 709 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 NCLNQ969V3 563 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 RMND5BQ96G75 393 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 BMFQ96LC9 184 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 PANX1Q96RD7 426 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SPNS1Q9H2V7 528 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 DMRT3Q9NQL9 472 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CCDC177Q9NQR7 707 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 DNAJB9Q9UBS3 223 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 BTNL2Q9UIR0 455 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 UTS2RQ9UKP6 389 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 MAPRE3Q9UPY8 281 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SPEGQ15772 3267 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CLIC1O00299 241 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ARHGAP33O14559 1287 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SH3BGRLO75368 114 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 OR6B1O95007 311 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SNAP29O95721 258 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 SERPINA1P01009 418 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 IDSP22304 550 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 IGFALSP35858 605 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 AGERQ15109 404 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 TEAD4Q15561 434 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 HKDC1Q2TB90 917 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 NADK2Q4G0N4 442 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 PAGE2BQ5JRK9 111 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ANKRD26P1Q6NSI1 321 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 USP51Q70EK9 711 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 AMZ2Q86W34 360 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 TSPAN14Q8NG11 270 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 OR5AR1Q8NGP9 310 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 CDC26Q8NHZ8 85 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 MAGEE2Q8TD90 523 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 POP5Q969H6 163 aaKnown RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 SH3KBP1Q96B97 665 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 COQ8BQ96D53 544 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms