RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CD1DP15813 335 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 STMN1P16949 149 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 JAK1P23458 1154 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 HNF4AP41235 474 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 PLTPP55058 493 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 CAV1Q03135 178 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 SLBPQ14493 270 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 RBBP5Q15291 538 aaKnown RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 OR4D1Q15615 310 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 KBTBD12Q3ZCT8 623 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 CDKL4Q5MAI5 379 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 ACER2Q5QJU3 275 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 PRAMEF9Q5VWM5 478 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 FCRLBQ6BAA4 426 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 QSOX2Q6ZRP7 698 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 BEST3Q8N1M1 668 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 PDPRQ8NCN5 879 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 NR4A3Q92570 626 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 MAGEB10Q96LZ2 347 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 LPAR4Q99677 370 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 RAB17Q9H0T7 212 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 STMN3Q9NZ72 180 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 GPRC5BQ9NZH0 403 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 TXNDC16Q9P2K2 825 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 IGKV3D-11A0A0A0MRZ8 115 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 MAN1A2O60476 641 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 PRAMEF2O60811 474 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 B4GALT2O60909 372 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 CLDN1O95832 211 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 RNH1P13489 461 aaKnown RBP11.71□□□□□ -0.53
CPSF4-208ENST00000452047 GSTM2P28161 218 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 HNRNPH1P31943 449 aaKnown RBP11.71□□□□□ -0.53
CPSF4-208ENST00000452047 GMPRP36959 345 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 OR4D2P58180 307 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 SLC26A5P58743 744 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 RAB10P61026 200 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 ATP6V0D1P61421 351 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 BTG2P78543 158 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 C4orf17Q53FE4 359 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 FBXO48Q5FWF7 155 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 TOR1AIP1Q5JTV8 583 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 GPSM1Q86YR5 675 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 TCAIMQ8N3R3 496 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 MDS2Q8NDY4 140 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 TTLQ8NG68 377 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 ELP5Q8TE02 316 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 GAL3ST3Q96A11 431 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 KIAA1191Q96A73 305 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 ZNF354BQ96LW1 612 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 EHD1Q9H4M9 534 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 NT5DC2Q9H857 520 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 WWOXQ9NZC7 414 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 OSGIN2Q9Y236 505 aa11.71□□□□□ -0.53
CPSF4-208ENST00000452047 TCRBV16S1A1N1A0A5B0 115 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 LRIT2A6NDA9 550 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 FAM227AF5H4B4 570 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PRMT3O60678 531 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 FAM155BO75949 473 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 STSP08842 583 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SLC35E2BP0CK96 405 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 EPORP19235 508 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CD22P20273 847 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 MAOAP21397 527 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SPRP35270 261 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 MAGEA4P43358 317 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 KCNC1P48547 511 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 HSPA7P48741 367 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 GUCY2DQ02846 1103 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ACTN3Q08043 901 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 DLG1Q12959 904 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 TUBA3CQ13748 450 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 MEP1AQ16819 746 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 GRTP1Q5TC63 336 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SULT1C3Q6IMI6 304 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 TUBA3EQ6PEY2 450 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 MAMDC2Q7Z304 686 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CCDC25Q86WR0 208 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CTAGE3PQ8IX95 158 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 LGI4Q8N135 537 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CA13Q8N1Q1 262 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SLC5A8Q8N695 610 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PPM1NQ8N819 430 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 FBF1Q8TES7 1133 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ESAMQ96AP7 390 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 MS4A6EQ96DS6 147 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 WDR34Q96EX3 536 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SEC16BQ96JE7 1060 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PTCHD1Q96NR3 888 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 SIGLEC12Q96PQ1 595 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms