RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RPS13P62277 151 aaKnown RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 IFT88Q13099 833 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 TGIF1Q15583 401 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 NDUFA9Q16795 377 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 MANEAQ5SRI9 462 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 C10orf62Q5T681 223 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 GARNL3Q5VVW2 1013 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 CLEC6AQ6EIG7 209 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 FAM199XQ6PEV8 388 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 UNQ6494/PRO21346Q6UXR6 183 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 DSELQ8IZU8 1212 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 ANKS4BQ8N8V4 417 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 METTL6Q8TCB7 284 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-202ENST00000451053 FGF11Q92914 225 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 LRFN5Q96NI6 719 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 F2RL3Q96RI0 385 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 HBEGFQ99075 208 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 ADGRE2Q9UHX3 823 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 SNX6Q9UNH7 406 aa12.38□□□□□ -0.43
VPS33A-202ENST00000451053 A0A0G2JN53 185 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 TMEM233B4DJY2 109 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 RRP9O43818 475 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 ETHE1O95571 254 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 PDYNP01213 254 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 LIPCP11150 499 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SERPINB3P29508 390 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 OR1D4P47884 311 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 ARFIP2P53365 341 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 AQP5P55064 265 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 PCBP4P57723 403 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 RAB8AP61006 207 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 PHEXP78562 749 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF33BQ06732 778 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 FAM53BQ14153 422 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 MAP7Q14244 749 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SLC9A5Q14940 896 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 TERF2Q15554 542 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 ADPRMQ3LIE5 342 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 KHDRBS2Q5VWX1 349 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 PDSS2Q86YH6 399 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 ESX1Q8N693 406 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 PROKR1Q8TCW9 393 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 TWIST2Q8WVJ9 160 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SELENOMQ8WWX9 145 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 MR1Q95460 341 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 NKD1Q969G9 470 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 GAL3ST3Q96A11 431 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
VPS33A-202ENST00000451053 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 LHX9Q9NQ69 397 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 FIS1Q9Y3D6 152 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 SLC22A7Q9Y694 548 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 MAU2Q9Y6X3 613 aa12.37□□□□□ -0.43
VPS33A-202ENST00000451053 A0A0G2JND7 137 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF860A6NHJ4 632 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SGK494L7N484 410 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SAP18O00422 153 aaKnown RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ERI3O43414 337 aaKnown RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 VPS4BO75351 444 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 KLHL18O94889 574 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 KLK3P07288 261 aaPredicted RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SMIM10L1P0DMW3 83 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ALOX12P18054 663 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 PLA2G16P53816 162 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 DCDP81605 110 aaKnown RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ABHD18Q0P651 414 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ABRAXAS2Q15018 415 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 HERC3Q15034 1050 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 NKAIN1Q4KMZ8 207 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ABHD17CQ6PCB6 329 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 FAM198BQ6UWH4 519 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ACAD11Q709F0 780 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 ABHD13Q7L211 337 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 UBE3DQ7Z6J8 389 aa12.36□□□□□ -0.43
VPS33A-202ENST00000451053 SHISA5Q8N114 240 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms