RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 URADA6NGE7 173 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 CDRT15L2A8MXV6 281 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM233B4DJY2 109 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SNRNP200O75643 2136 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 KIAA0754O94854 1291 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 HBQ1P09105 142 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 BMP2P12643 396 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ZNF28P17035 718 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ALAS2P22557 587 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC5A2P31639 672 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 HNRNPH1P31943 449 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 MDH1P40925 334 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 HTR6P50406 440 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 RNF144AP50876 292 aaPredicted RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 STXBP1P61764 594 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 RPS13P62277 151 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SNRPNP63162 240 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 PHEXP78562 749 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SHC2P98077 582 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 GUCY1A3Q02108 690 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 CUL3Q13618 768 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 COL9A2Q14055 689 aaPredicted RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 FAM53BQ14153 422 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 HERC3Q15034 1050 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 NDUFA9Q16795 377 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 MUM1Q2TAK8 710 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ADPRMQ3LIE5 342 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM35AQ53FP2 167 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 TOR1AIP1Q5JTV8 583 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 KHDRBS2Q5VWX1 349 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 RHBDD2Q6NTF9 364 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SCIMPQ6UWF3 145 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 RNF165Q6ZSG1 346 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 TTLL10Q6ZVT0 673 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ABHD13Q7L211 337 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 UBE3DQ7Z6J8 389 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 KIRREL3Q8IZU9 778 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 AFAP1L2Q8N4X5 818 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 GBP7Q8N8V2 638 aaPredicted RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 AGR3Q8TD06 166 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 UTP15Q8TED0 518 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SELENOMQ8WWX9 145 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 MS4A6EQ96DS6 147 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 CLIP3Q96DZ5 547 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 C10orf90Q96M02 699 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 C7orf26Q96N11 449 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SERPINI1Q99574 410 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 MS4A8Q9BY19 250 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ULBP3Q9BZM4 244 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 REXO4Q9GZR2 422 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 OR51B5Q9H339 312 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 TUBB1Q9H4B7 451 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ACTR5Q9H9F9 607 aaPredicted RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 BRF2Q9HAW0 419 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 ASCL3Q9NQ33 180 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 PNPOQ9NVS9 261 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 FOXJ2Q9P0K8 574 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SRPK3Q9UPE1 567 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 MRPS2Q9Y399 296 aaKnown RBP7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 FIS1Q9Y3D6 152 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 SPTBN2O15020 2390 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 PTPRBP23467 1997 aa7.17□□□□□ -1.26
AC004540.1-206ENST00000448056 HEATR5BQ9P2D3 2071 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 A0A1B0GX78 115 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 TCP11X1B4DZS4 312 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 SLCO1B7G3V0H7 640 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 MEN1O00255 615 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC28A1O00337 649 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 SAP18O00422 153 aaKnown RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 DSCR3O14972 297 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ERI3O43414 337 aaKnown RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 FOXS1O43638 330 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 BRINP1O60477 761 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 CPNE3O75131 537 aaKnown RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 SH3BGRLO75368 114 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 STK17BO94768 372 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ETHE1O95571 254 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ONECUT2O95948 504 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 CHEK2O96017 543 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 LINC00032P0C843 101 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ZNF888P0CJ79 500 aaPredicted RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 HSD3B1P14060 373 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ALOX12P18054 663 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 HSD3B2P26439 372 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 GPC1P35052 558 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 RORAP35398 523 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ARFIP1P53367 373 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 PLA2G16P53816 162 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 GYS2P54840 703 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 RAB8AP61006 207 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 BTN3A2P78410 334 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 TGM3Q08188 693 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ABHD18Q0P651 414 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 CSTF3Q12996 717 aaKnown RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 C1orf189Q5VU69 101 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 ABHD17CQ6PCB6 329 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 C6orf15Q6UXA7 325 aaPredicted RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 PRSS41Q7RTY9 318 aa7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 TIPARPQ7Z3E1 657 aaKnown RBP7.16□□□□□ -1.26
AC004540.1-206ENST00000448056 CRLF3Q8IUI8 442 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms