RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GLTPQ9NZD2 209 aa13.42□□□□□ -0.26
VPS52-212ENST00000445902 COMMD3Q9UBI1 195 aa13.42□□□□□ -0.26
VPS52-212ENST00000445902 RABL2BQ9UNT1 228 aa13.42□□□□□ -0.26
VPS52-212ENST00000445902 ZNF670-ZNF695F2Z2N8 137 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ATF4P18848 351 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 EPORP19235 508 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 HOXD9P28356 352 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 MAP2K3P46734 347 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CLCN4P51793 760 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SPHARQ15513 63 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 MICAQ29983 383 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 WSCD2Q2TBF2 565 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 FLYWCH1Q4VC44 716 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 NAGSQ8N159 534 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SYNPOQ8N3V7 929 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 TESCQ96BS2 214 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 UPRTQ96BW1 309 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 TCF25Q9BQ70 676 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 MGME1Q9BQP7 344 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 NTMT1Q9BV86 223 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 EVA1BQ9NVM1 165 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 UCKL1Q9NWZ5 548 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 KLHL21Q9UJP4 597 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 IGLV3-10A0A075B6K4 115 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PRAMEF25A6NGN4 478 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 A8MX80 341 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ANKRD66B4E2M5 251 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 BTN3A3O00478 584 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ADAMDEC1O15204 470 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CA12O43570 354 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 GCM2O75603 506 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 TSPAN9O75954 239 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 OR7A10O76100 309 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 HBQ1P09105 142 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ALPIP09923 528 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PRPS2P11908 318 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CPN2P22792 545 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 HLA-DMAP28067 261 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 RGS4P49798 205 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CCL23P55773 120 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 WNT3P56703 355 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ZNF267Q14586 743 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 ZNF792Q3KQV3 632 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 DUSP28Q4G0W2 176 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 LCN1P1Q5VSP4 162 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 NOXRED1Q6NXP6 359 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 LINGO4Q6UY18 593 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SKA2Q8WVK7 121 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 MTERF3Q96E29 417 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 STUB1Q9UNE7 303 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 BRCA2P51587 3418 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 OTOFQ9HC10 1997 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 FAM240BA0A1B0GVZ2 78 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 MBLAC1A4D2B0 266 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 CBX4O00257 560 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ANXA8P13928 327 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 CSTF2P33240 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS52-212ENST00000445902 CRATP43155 626 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SLC9A3P48764 834 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.264e-9■■■□□ 16.2
VPS52-212ENST00000445902 P2RY14Q15391 338 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 TRIQKQ629K1 86 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CREB3L2Q70SY1 520 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SLC51BQ86UW2 128 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SERPINA9Q86WD7 417 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 TTC9BQ8N6N2 239 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 AQP11Q8NBQ7 271 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 C19orf18Q8NEA5 215 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 CREB3L4Q8TEY5 395 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 EID2BQ96D98 161 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
VPS52-212ENST00000445902 MSANTD3Q96H12 275 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 WDFY2Q96P53 400 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 ACAT2Q9BWD1 397 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SSR3Q9UNL2 185 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 PADI2Q9Y2J8 665 aa13.41□□□□□ -0.26
VPS52-212ENST00000445902 SNTNA6NMZ2 147 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 PDGFAP04085 211 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 SDC2P34741 201 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 GAB1Q13480 694 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 DALRD3Q5D0E6 543 aaKnown RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 PGBD3Q8N328 593 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 PHF21AQ96BD5 680 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 PPIL3Q9H2H8 161 aaKnown RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 ARL15Q9NXU5 204 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 MARCH2Q9P0N8 246 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 PLEKHB1Q9UF11 243 aaPredicted RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 APOL3O95236 402 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 MSL3P1P0C860 447 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 SLC2A2P11168 524 aaPredicted RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 ZNF30P17039 623 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 CHMP24386 653 aa13.4□□□□□ -0.26
VPS52-212ENST00000445902 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
VPS52-212ENST00000445902 POU4F3Q15319 338 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms