RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 OR2T6Q8NHC8 308 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 HCAR2Q8TDS4 363 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 METTL21AQ8WXB1 218 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZNF486Q96H40 463 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 NKX3-1Q99801 234 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 THUMPD2Q9BTF0 503 aaKnown RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 KLK4Q9Y5K2 254 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 LRRC37A3O60309 1634 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 IGSF1Q8N6C5 1336 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 MSH6P52701 1360 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 C15orf61A6NNL5 157 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLC30A4O14863 429 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 IFIT3O14879 490 aaKnown RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CGAP01215 116 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CASTP20810 708 aaKnown RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 SFTPDP35247 375 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 OPRL1P41146 370 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CETN2P41208 172 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 SOX3P41225 446 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLC6A12P48065 614 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 XGP55808 180 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 PMP22Q01453 160 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CASC1Q6TDU7 716 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 FIP1L1Q6UN15 594 aaKnown RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 PIGWQ7Z7B1 504 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 FAM89BQ8N5H3 189 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 GBP7Q8N8V2 638 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZNRF4Q8WWF5 429 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 DNASE1L2Q92874 299 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CENPTQ96BT3 561 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 RBM41Q96IZ5 413 aaKnown RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CLEC7AQ9BXN2 247 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 RAB9BQ9NP90 201 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 BARHL2Q9NY43 387 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 ERAP1Q9NZ08 941 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 ASIC3Q9UHC3 531 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 PXDNLA1KZ92 1463 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 RGPD8O14715 1765 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 MAP3K5Q99683 1374 aa3.89□□□□□ -1.79
HMGB3P6-201ENST00000444896 CHD2O14647 1828 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 CRB1P82279 1406 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 ADGRL3Q9HAR2 1447 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 FAM208AQ9UK61 1670 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 TRBV4-1A0A0J9YWV2 114 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 TMEM150CB9EJG8 249 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 H0YAE9 185 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 ST8SIA3O43173 380 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 RPN1P04843 607 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 SERPINB2P05120 415 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 PTMSP20962 102 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 ELAVL4P26378 380 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR3A2P47893 321 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 KCNJ1P48048 391 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR1D5P58170 312 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 SRSF9Q13242 221 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 MTF1Q14872 753 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 TMEM132DQ14C87 1099 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 EFTUD2Q15029 972 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 MTHFSDQ2M296 383 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 SPOUT1Q5T280 376 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 TTC27Q6P3X3 843 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 PRSS55Q6UWB4 352 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLC24A5Q71RS6 500 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 MCM10Q7L590 875 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 C5orf24Q7Z6I8 188 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 DZIP1Q86YF9 867 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 CCDC60Q8IWA6 550 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 GPC2Q8N158 579 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 RAB42Q8N4Z0 105 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 CCDC63Q8NA47 563 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 UXS1Q8NBZ7 420 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 NCOA7Q8NI08 942 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 SGF29Q96ES7 293 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 BSCL2Q96G97 398 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 C2orf48Q96LS8 159 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 BTBD9Q96Q07 612 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 PARK7Q99497 189 aaKnown RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 GRPEL1Q9HAV7 217 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 ELF5Q9UKW6 265 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
HMGB3P6-201ENST00000444896 RGS12O14924 1447 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 ATP10DQ9P241 1426 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 CACNA1FO60840 1977 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 MARF1Q9Y4F3 1742 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 LTN1O94822 1766 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 N4BP2Q86UW6 1770 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 H3BMM5 538 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 HSP90AB1P08238 724 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 DLATP10515 647 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR3A1P47881 315 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 SCN1BQ07699 218 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 IL10RBQ08334 325 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 DRP2Q13474 957 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 PTK6Q13882 451 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms