RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 PIK3R1P27986 724 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 CDX1P47902 265 aaPredicted RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ZFP36L2P47974 494 aaKnown RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ZNF542PQ5EBM4 170 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 GPR141Q7Z602 305 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 DND1Q8IYX4 353 aaKnown RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 FBXL16Q8N461 479 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 TEX26Q8N6G2 289 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 CCDC89Q8N998 374 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 OR5M9Q8NGP3 310 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 HEXDCQ8WVB3 486 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 LURAP1Q96LR2 239 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 AK8Q96MA6 479 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 PSMB7Q99436 277 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 MGME1Q9BQP7 344 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 JPT2Q9H910 190 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 RPF1Q9H9Y2 349 aaKnown RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 C3orf14Q9HBI5 128 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 CHCHD3Q9NX63 227 aaKnown RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 GPR83Q9NYM4 423 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ANAPC5Q9UJX4 755 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 PILRAQ9UKJ1 303 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 MRPS18CQ9Y3D5 142 aaKnown RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ABCA5Q8WWZ7 1642 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 ADAMTS12P58397 1594 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 GRIN2BQ13224 1484 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 IGKV6D-41A0A0C4DH26 115 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 TSPY2A6NKD2 308 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 FAM86B1E9PN63 330 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 RNF103O00237 685 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 FLRT2O43155 660 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 PGLSO95336 258 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 MT-ND2P03891 347 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 CENPBP07199 599 aaPredicted RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 FAM86B2P0C5J1 330 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 ADORA3P0DMS8 318 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 EEF2P13639 858 aaKnown RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 PDGFRAP16234 1089 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 LBPP18428 481 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 BCL3P20749 454 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 ZNF41P51814 821 aaPredicted RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 NDUFV3P56181 108 aaKnown RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 FAM182AQ5T1J6 154 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 FAM46CQ5VWP2 391 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 Q6ZR54 194 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 COX8CQ7Z4L0 72 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 CATSPER3Q86XQ3 398 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 CCDC185Q8N715 623 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 Q8NFD4 153 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 SSC4DQ8WTU2 575 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 ST6GALNAC6Q969X2 333 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 SIPA1Q96FS4 1042 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 UBAC1Q9BSL1 405 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 PAPOLGQ9BWT3 736 aaKnown RBP3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 OCR1Q9BZK8 76 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 IL1RAPQ9NPH3 570 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 CLIC5Q9NZA1 410 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 SATB2Q9UPW6 733 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 KLK4Q9Y5K2 254 aa3.43□□□□□ -1.86
AC003001.1-201ENST00000443247 AQRO60306 1485 aaKnown RBP eCLIP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 ABCC10Q5T3U5 1492 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 A0A087WV48 116 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 ARHGEF33A8MVX0 844 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 PGRMC2O15173 223 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 OGTO15294 1046 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 PHF1O43189 567 aaPredicted RBP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 ZNF749O43361 778 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 FCGR3BO75015 233 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 HPP00738 406 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 C9P02748 559 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 PSMB4P28070 264 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 KHKP50053 298 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 GCKRQ14397 625 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 GRB14Q14449 540 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 EIPR1Q53HC9 387 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 SEL1L3Q68CR1 1132 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 ZC3H3Q8IXZ2 948 aaKnown RBP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 NCOA7Q8NI08 942 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 OCC1Q8TAD7 63 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 CCDC28BQ9BUN5 200 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 DPEP2Q9H4A9 486 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 C10orf88Q9H8K7 445 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 PFDN4Q9NQP4 134 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 CFDP1Q9UEE9 299 aaPredicted RBP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 NCKAP1Q9Y2A7 1128 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 PPRC1Q5VV67 1664 aaKnown RBP3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 GON4LQ3T8J9 2241 aa3.42□□□□□ -1.86
AC003001.1-201ENST00000443247 IGLV3-10A0A075B6K4 115 aa3.41□□□□□ -1.86
AC003001.1-201ENST00000443247 NPIPA3F8WFD2 350 aa3.41□□□□□ -1.86
AC003001.1-201ENST00000443247 PDHXO00330 501 aa3.41□□□□□ -1.86
AC003001.1-201ENST00000443247 TNFSF12O43508 249 aa3.41□□□□□ -1.86
AC003001.1-201ENST00000443247 DKC1O60832 514 aaKnown RBP eCLIP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms