RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MAP2K4P45985 399 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RBP5P82980 135 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRKCDQ05655 676 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CYP24A1Q07973 514 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ORC2Q13416 577 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 TFDP2Q14188 446 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GK2Q14410 553 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GRM4Q14833 912 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GPR19Q15760 415 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 POM121L1PQ3SYA9 428 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 XKR3Q5GH77 459 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 C6orf141Q5SZD1 244 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLC27A4Q6P1M0 643 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRMT9Q6P2P2 845 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF613Q6PF04 617 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GK5Q6ZS86 529 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CDHR3Q6ZTQ4 885 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TRILQ7L0X0 811 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SIAH1Q8IUQ4 282 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RHOT1Q8IXI2 618 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZZZ3Q8IYH5 903 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLFN12Q8IYM2 578 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZDHHC14Q8IZN3 488 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NAGSQ8N159 534 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF781Q8N8C0 355 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DEFB124Q8NES8 71 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LPCAT1Q8NF37 534 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 OR10H5Q8NGA6 315 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DYNC2LI1Q8TCX1 351 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CHAC2Q8WUX2 184 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SLCO2A1Q92959 643 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MUL1Q969V5 352 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CPNE4Q96A23 557 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 LINGO1Q96FE5 620 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TMEM41AQ96HV5 264 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CPB2Q96IY4 423 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TPD52L3Q96J77 140 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LRFN5Q96NI6 719 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KCTD15Q96SI1 283 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 WDR18Q9BV38 432 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NKX6-2Q9C056 277 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF385DQ9H6B1 395 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SPACA1Q9HBV2 294 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 UBE2TQ9NPD8 197 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 GHRLQ9UBU3 117 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF214Q9UL59 606 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CDH9Q9ULB4 789 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KCNIP3Q9Y2W7 256 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HCFC2Q9Y5Z7 792 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 AP1M2Q9Y6Q5 423 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LAMA4Q16363 1823 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ANKRD12Q6UB98 2062 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ALPK2Q86TB3 2170 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KALRNO60229 2985 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GNG14A0A1W2PPG7 69 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TCRBV9S1A1TA0A576 114 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NPIPA7E9PJI5 369 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 INMT-MINDY4F8WBC2 141 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 K7ERI5 159 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 M0QYV0 167 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CLDN4O14493 209 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LDLRAD4O15165 306 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SSNA1O43805 119 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NPHS1O60500 1241 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TRIM13O60858 407 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 SMPD2O60906 423 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRKRAO75569 313 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 KRT33AO76009 404 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 B3GAT3O94766 335 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RASAL1O95294 804 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GCNT3O95395 438 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GOT2P00505 430 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 RPLP0P05388 317 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CD2P06729 351 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ACAA1P09110 424 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 FBXO45P0C2W1 286 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 NPIPA8P0DM63 369 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ACADMP11310 421 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF30P17039 623 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ARF4P18085 180 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 SAT1P21673 171 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CRHBPP24387 322 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 VIPR2P41587 438 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CRATP43155 626 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CTSKP43235 329 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TGM4P49221 684 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 HNRNPKP61978 463 aaKnown RBP eCLIP2.68□□□□□ -1.98
LIG4-203ENST00000442234 PURAQ00577 322 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 MYL7Q01449 175 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LIPEQ05469 1076 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TNK2Q07912 1038 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRKG2Q13237 762 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KCNAB2Q13303 367 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PWP1Q13610 501 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KCNC3Q14003 757 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KRT33BQ14525 404 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CLINT1Q14677 625 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 GANABQ14697 944 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 PDK2Q15119 407 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CTF1Q16619 201 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms