RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CXCR2P25025 360 aa10□□□□□ -0.81
CD44-210ENST00000434472 PSMB9P28065 219 aa10□□□□□ -0.81
CD44-210ENST00000434472 CHI3L1P36222 383 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 MVDP53602 400 aa10□□□□□ -0.81
CD44-210ENST00000434472 NTHL1P78549 312 aa10□□□□□ -0.81
CD44-210ENST00000434472 TAP2Q03519 686 aa10□□□□□ -0.81
CD44-210ENST00000434472 AQP6Q13520 282 aa10□□□□□ -0.81
CD44-210ENST00000434472 TSTA3Q13630 321 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 NR1D2Q14995 579 aa10□□□□□ -0.81
CD44-210ENST00000434472 CLCA4Q14CN2 919 aa10□□□□□ -0.81
CD44-210ENST00000434472 EIF4HQ15056 248 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 HNRNPA1L2Q32P51 320 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 POM121L1PQ3SYA9 428 aa10□□□□□ -0.81
CD44-210ENST00000434472 CRB2Q5IJ48 1285 aa10□□□□□ -0.81
CD44-210ENST00000434472 PRAMEF14Q5SWL7 426 aa10□□□□□ -0.81
CD44-210ENST00000434472 UBE2UQ5VVX9 321 aa10□□□□□ -0.81
CD44-210ENST00000434472 PRAMEF13Q5VWM6 474 aa10□□□□□ -0.81
CD44-210ENST00000434472 ANGPTL8Q6UXH0 198 aa10□□□□□ -0.81
CD44-210ENST00000434472 GRASPQ7Z6J2 395 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 ARMC8Q8IUR7 673 aa10□□□□□ -0.81
CD44-210ENST00000434472 PHF6Q8IWS0 365 aaKnown RBP eCLIP10□□□□□ -0.81
CD44-210ENST00000434472 SLC15A4Q8N697 577 aa10□□□□□ -0.81
CD44-210ENST00000434472 OR10G2Q8NGC3 310 aa10□□□□□ -0.81
CD44-210ENST00000434472 SPPL3Q8TCT6 385 aa10□□□□□ -0.81
CD44-210ENST00000434472 GEMIN6Q8WXD5 167 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 FOXJ1Q92949 421 aa10□□□□□ -0.81
CD44-210ENST00000434472 ZSWIM3Q96MP5 696 aa10□□□□□ -0.81
CD44-210ENST00000434472 QRFPRQ96P65 431 aa10□□□□□ -0.81
CD44-210ENST00000434472 PSD2Q9BQI7 771 aa10□□□□□ -0.81
CD44-210ENST00000434472 ACOT13Q9NPJ3 140 aa10□□□□□ -0.81
CD44-210ENST00000434472 DYRK4Q9NR20 520 aa10□□□□□ -0.81
CD44-210ENST00000434472 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
CD44-210ENST00000434472 RAPGEFL1Q9UHV5 662 aa10□□□□□ -0.81
CD44-210ENST00000434472 MRPS23Q9Y3D9 190 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 LYVE1Q9Y5Y7 322 aa10□□□□□ -0.81
CD44-210ENST00000434472 CLDN24A6NM45 220 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 SPINT1O43278 529 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 GCM2O75603 506 aaPredicted RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 SEMA3DO95025 777 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 NFATC1O95644 943 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 TGFB1P01137 390 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ARAFP10398 606 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 C6P13671 934 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ETFAP13804 333 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ACADLP28330 430 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 KRT20P35900 424 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 MAP2K4P45985 399 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 GSTM5P46439 218 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 CRYBA2P53672 197 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 TAS2R50P59544 299 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 HBA1P69905 142 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 CDK6Q00534 326 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 PPIGQ13427 754 aaKnown RBP eCLIP9.99□□□□□ -0.81
CD44-210ENST00000434472 RGS21Q2M5E4 152 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ADNP2Q6IQ32 1131 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 CCDC81Q6ZN84 652 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ARMCX6Q7L4S7 300 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 DSG4Q86SJ6 1040 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ADCK1Q86TW2 530 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 SLCO6A1Q86UG4 719 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ENTHD1Q8IYW4 607 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 MINDY2Q8NBR6 621 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 OR4C15Q8NGM1 316 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 NFKBIDQ8NI38 313 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 WDR48Q8TAF3 677 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 CHPT1Q8WUD6 406 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 RAB7BQ96AH8 199 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 SH3YL1Q96HL8 342 aaPredicted RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 ZNF300Q96RE9 604 aaPredicted RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 NLNQ9BYT8 704 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ZDHHC5Q9C0B5 715 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 PITHD1Q9GZP4 211 aaPredicted RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 ZNF556Q9HAH1 456 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 NDUFAF4Q9P032 175 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 GULP1Q9UBP9 304 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ICKQ9UPZ9 632 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 ERGIC3Q9Y282 383 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 COQ6Q9Y2Z9 468 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 FAM32AQ9Y421 112 aaKnown RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 PCDHGA6Q9Y5G7 932 aa9.99□□□□□ -0.81
CD44-210ENST00000434472 DNMT3AQ9Y6K1 912 aaPredicted RBP9.99□□□□□ -0.81
CD44-210ENST00000434472 OR2A25A4D2G3 310 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 KPNA4O00629 521 aaPredicted RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 FADS2O95864 444 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 OCM2P0CE71 109 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 OCMP0CE72 109 aaPredicted RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 ADRB3P13945 408 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 EPCAMP16422 314 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 CD6P30203 668 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 MASP1P48740 699 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 SPIBQ01892 262 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 EEF1A2Q05639 463 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 ELAVL3Q14576 367 aaKnown RBP9.98□□□□□ -0.81
CD44-210ENST00000434472 ARHGAP19Q14CB8 494 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 MICAQ29983 383 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 ANKDD1AQ495B1 522 aa9.98□□□□□ -0.81
CD44-210ENST00000434472 C9orf64Q5T6V5 341 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms