RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 LAPTM4BQ86VI4 370 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CDYL2Q8N8U2 506 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LRRC20Q8TCA0 184 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RHBGQ9H310 441 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 KCNK13Q9HB14 408 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ING4Q9UNL4 249 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CORINQ9Y5Q5 1042 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SNRNP200O75643 2136 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 POM121CA8CG34 1229 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 EFCAB7A8K855 629 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MUSKO15146 869 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF217O75362 1048 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CST1P01037 141 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CTSHP09668 335 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MAPK12P53778 367 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CDH8P55286 799 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MSS51Q4VC12 460 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 COLEC12Q5KU26 742 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CLVS2Q5SYC1 327 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SYT6Q5T7P8 510 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GPR139Q6DWJ6 353 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ADNP2Q6IQ32 1131 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 POMZP3Q6PJE2 187 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PLET1Q6UQ28 207 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SBSNQ6UWP8 590 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC81Q6ZN84 652 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ERN2Q76MJ5 926 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ISCA2Q86U28 154 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CHPFQ8IZ52 775 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF548Q8NEK5 533 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FAM46DQ8NEK8 389 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 OR5P2Q8WZ92 322 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GLYATL1Q969I3 302 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 OR2AG1Q9H205 316 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LYRM4Q9HD34 91 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SSR3Q9UNL2 185 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 UNC119BA6NIH7 251 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NPIPB13A6NJU9 1138 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 OR6C65A6NJZ3 312 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HNRNPCL2B2RXH8 293 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NPIPB4C9JG80 1138 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CAPN5O15484 640 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SLC4A1P02730 911 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SAGP10523 405 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DDCP20711 480 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RPS5P46782 204 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 EPHA4P54764 986 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF404Q494X3 552 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 Q6ZNB5 142 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PTAR1Q7Z6K3 402 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SLC51AQ86UW1 340 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NAT6Q93015 286 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ECHDC3Q96DC8 303 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRPV5Q9NQA5 729 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MAN2C1Q9NTJ4 1040 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LIMD1Q9UGP4 676 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 IQCMA0A1B0GVH7 501 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NEMP2A6NFY4 417 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SULT1B1O43704 296 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PSIP1O75475 530 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GATBO75879 557 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CST3P01034 146 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 STSP08842 583 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRR35P0CG20 571 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CCND3P30281 292 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 AGTR1P30556 359 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DCST1Q5T197 706 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FBXO46Q6PJ61 603 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ANGPTL8Q6UXH0 198 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TMIGD1Q6UXZ0 262 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CMC1Q7Z7K0 106 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRIM48Q8IWZ4 208 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 JPH3Q8WXH2 748 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GAL3ST3Q96A11 431 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HAVCR1Q96D42 359 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 KCTD7Q96MP8 289 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MED18Q9BUE0 208 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RPS6KB2Q9UBS0 482 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CD300AQ9UGN4 299 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GPR45Q9Y5Y3 372 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 A0A0G2JPF8 293 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HNRNPCL3B7ZW38 293 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PAPLNO95428 1278 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 METTL18O95568 372 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 H1F0P07305 194 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HNRNPCL4P0DMR1 293 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ADH5P11766 374 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ARRB1P49407 418 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CDC20Q12834 499 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CHIT1Q13231 466 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SERTAD2Q14140 314 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LRRC36Q1X8D7 754 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRAMEF18Q5VWM3 479 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RAB12Q6IQ22 244 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CD300LGQ6UXG3 332 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DPPA2Q7Z7J5 298 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HPS6Q86YV9 775 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HDDC3Q8N4P3 179 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TTC29Q8NA56 475 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms