RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 G3BP2Q9UN86 482 aaKnown RBP16.04■□□□□ 0.16
UBE3D-204ENST00000430071 NTNG1Q9Y2I2 539 aa16.04■□□□□ 0.16
UBE3D-204ENST00000430071 MYO7BQ6PIF6 2116 aa16.04■□□□□ 0.16
UBE3D-204ENST00000430071 A8MT66 165 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 IDSB3KWA1 339 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 DLX3O60479 287 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 CCNT2O60583 730 aaKnown RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 SMIM24O75264 130 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 KLHL18O94889 574 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 SIX3O95343 332 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 RELAQ04206 551 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 MRPL49Q13405 166 aaKnown RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 DSG2Q14126 1118 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 CATSPEREQ5SY80 951 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 IGFL3Q6UXB1 125 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 LRRC70Q7Z2Q7 622 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 CUZD1Q86UP6 607 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 ZC3H7AQ8IWR0 971 aaKnown RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 CISD2Q8N5K1 135 aaKnown RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 KCT2Q8NC54 265 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 ZNF740Q8NDX6 193 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 RERGQ96A58 199 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 SNRNP40Q96DI7 357 aaKnown RBP16.03■□□□□ 0.16
UBE3D-204ENST00000430071 MOCOSQ96EN8 888 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 SMC6Q96SB8 1091 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 DRC3Q9H069 523 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 TMBIM4Q9HC24 238 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 ZNF160Q9HCG1 818 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 ASF1BQ9NVP2 202 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 SENP1Q9P0U3 644 aa16.03■□□□□ 0.16
UBE3D-204ENST00000430071 CACNA1DQ01668 2161 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 G3V2L1 256 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 K7EPI3 171 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 TYROBPO43914 113 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 PRAMEF4O60810 478 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 DNAJB6O75190 326 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 B3GALT4O96024 378 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 IGHEP01854 428 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 IL1RNP18510 177 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 EMP2P54851 167 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 EEF1A2Q05639 463 aaKnown RBP16.02■□□□□ 0.16
UBE3D-204ENST00000430071 CDC16Q13042 620 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.163e-6■■■□□ 14.6
UBE3D-204ENST00000430071 CCDC153Q494R4 210 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 CRB2Q5IJ48 1285 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 PRAMEF9Q5VWM5 478 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 SNX31Q8N9S9 440 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 ABHD11Q8NFV4 315 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 ZCCHC10Q8TBK6 192 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 SLC5A11Q8WWX8 675 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 TM4SF19Q96DZ7 209 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 THOC3Q96J01 351 aaKnown RBP16.02■□□□□ 0.16
UBE3D-204ENST00000430071 MAP10Q9P2G4 905 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 SLC17A7Q9P2U7 560 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 OPTCQ9UBM4 332 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 TMCO1Q9UM00 188 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 CDC14AQ9UNH5 594 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 PLLPQ9Y342 182 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 DYRK1BQ9Y463 629 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 KCNE2Q9Y6J6 123 aa16.02■□□□□ 0.16
UBE3D-204ENST00000430071 PCNX1Q96RV3 2341 aa16.02■□□□□ 0.15
UBE3D-204ENST00000430071 TCP11X1B4DZS4 312 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 STX16O14662 325 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 SASH3O75995 380 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 RNF224P0DH78 156 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 COX6A1P12074 109 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 TAC1P20366 129 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 ATP5F1P24539 256 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-204ENST00000430071 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
UBE3D-204ENST00000430071 PDK4Q16654 411 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 GARNL3Q5VVW2 1013 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 NXPE4Q6UWF7 544 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 ZYG11AQ6WRX3 759 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 SLCO4C1Q6ZQN7 724 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 TMPRSS11BQ86T26 416 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 ATCAYQ86WG3 371 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 PDSS2Q86YH6 399 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 GALNT11Q8NCW6 608 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 OR4K1Q8NGD4 311 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 NACC2Q96BF6 587 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 MVB12AQ96EY5 273 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 ZNF446Q9NWS9 450 aa16.01■□□□□ 0.15
UBE3D-204ENST00000430071 TNPO3Q9Y5L0 923 aaKnown RBP16.01■□□□□ 0.15
UBE3D-204ENST00000430071 KCNE1BA0A087WTH5 132 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 NBPF19A0A087WUL8 3843 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 SGK494L7N484 410 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 E2F3O00716 465 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 VPS4BO75351 444 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 BMP10O95393 424 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 HPP00738 406 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 ACPPP15309 386 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 GNAZP19086 355 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 HRH2P25021 359 aa16■□□□□ 0.15
UBE3D-204ENST00000430071 VARSP26640 1264 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms