RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SCN3BQ9NY72 215 aa13.12□□□□□ -0.31
THBS3-202ENST00000428962 TAS2R9Q9NYW1 312 aa13.12□□□□□ -0.31
THBS3-202ENST00000428962 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
THBS3-202ENST00000428962 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
THBS3-202ENST00000428962 TMEM98Q9Y2Y6 226 aa13.12□□□□□ -0.31
THBS3-202ENST00000428962 TPRKBQ9Y3C4 175 aa13.12□□□□□ -0.31
THBS3-202ENST00000428962 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
THBS3-202ENST00000428962 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 MITFO75030 526 aaPredicted RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ATE1O95260 518 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 KLK1P06870 262 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ITIH1P19827 911 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 PRIM2P49643 509 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SELENOWP63302 87 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 RAPSNQ13702 412 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ZNF630Q2M218 657 aaPredicted RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
THBS3-202ENST00000428962 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 OR5K2Q8NHB8 316 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 MUL1Q969V5 352 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 C7orf34Q96L11 122 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 TMEM38AQ9H6F2 299 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 PCDHGB3Q9Y5G1 929 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ANKDD1BA6NHY2 528 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 KMOO15229 486 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 MRPS14O60783 128 aaKnown RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 DIRAS1O95057 198 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 GBAP04062 536 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 CA3P07451 260 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ITGA2P17301 1181 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 AGXTP21549 392 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 OPRD1P41143 372 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 GSTM5P46439 218 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 RUNX3Q13761 415 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SCARB2Q14108 478 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 IFI44LQ53G44 452 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 KIAA1614Q5VZ46 1190 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 GTF2IRD2BQ6EKJ0 949 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 GTF2IRD2Q86UP8 949 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 MAL2Q969L2 176 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 IL17FQ96PD4 163 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 BARD1Q99728 777 aaKnown RBP13.11□□□□□ -0.31
THBS3-202ENST00000428962 LHPPQ9H008 270 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 RHBGQ9H310 441 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 CCNB1IP1Q9NPC3 277 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ETAA1Q9NY74 926 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 ANGPT4Q9Y264 503 aa13.11□□□□□ -0.31
THBS3-202ENST00000428962 A0A1W2PRB8 838 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 KAT7O95251 611 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 IL3P08700 152 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 CYP4B1P13584 511 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 ETFAP13804 333 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 JUNDP17535 347 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 MATN1P21941 496 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 FCARP24071 287 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 TEAD1P28347 426 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 AQP1P29972 269 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 SOAT1P35610 550 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 CCR8P51685 355 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 MVDP53602 400 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 CRYBA2P53672 197 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 SMPDL3AQ92484 453 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 PITX2Q99697 317 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 GPN2Q9H9Y4 310 aaPredicted RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 TAC3Q9UHF0 121 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 NDRG4Q9ULP0 352 aaKnown RBP13.1□□□□□ -0.31
THBS3-202ENST00000428962 PLAGL1Q9UM63 463 aa13.1□□□□□ -0.31
THBS3-202ENST00000428962 ICKQ9UPZ9 632 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms