RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 KLRC4-KLRK1H3BQV0 150 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 RSL1D1O76021 490 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 IFNW1P05000 195 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 RCVRNP35243 200 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 KCNC1P48547 511 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 EEFSECP57772 596 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 DCDP81605 110 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CHRNEQ04844 493 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 NIPAL4Q0D2K0 466 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 PARS2Q7L3T8 475 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 BOLLQ8N9W6 283 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 OR4C6Q8NH72 309 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 COQ8BQ96D53 544 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 KCNC2Q96PR1 638 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 SERHLQ9NQF3 203 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 POT1Q9NUX5 634 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 PTGFRNQ9P2B2 879 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 GLOD5A6NK44 160 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 TRIM38O00635 465 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 RIPK2O43353 540 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 ZFAND5O76080 213 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 SNRPB2P08579 225 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 DLSTP36957 453 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CDH15P55291 814 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 GPLD1P80108 840 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 GALNT2Q10471 571 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 BNIP1Q12981 228 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 SP140Q13342 867 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 EIF3IQ13347 325 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 KIR2DS3Q14952 304 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 ABRAXAS2Q15018 415 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CRELD2Q6UXH1 353 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 TRIM73Q86UV7 250 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 TMEM173Q86WV6 379 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 NRROSQ86YC3 692 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 SUMF1Q8NBK3 374 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CADM4Q8NFZ8 388 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 SGCDQ92629 289 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 ZIM3Q96PE6 472 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 TRIM2Q9C040 744 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 THUMPD1Q9NXG2 353 aaKnown RBP6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CCL26Q9Y258 94 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 RNF215Q9Y6U7 377 aa6.96□□□□□ -1.3
CNOT4-206ENST00000428680 CACNA1EQ15878 2313 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 VSTM2BA6NLU5 285 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GPR89AB7ZAQ6 455 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PMM2O15305 246 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CACNG3O60359 315 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GPR89BP0CG08 455 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 MAGP20916 626 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CBX5P45973 191 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 HK3P52790 923 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 RPA4Q13156 261 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SPIN4Q56A73 249 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 C1orf52Q8N6N3 182 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 RNF148Q8N7C7 305 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PDPRQ8NCN5 879 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PIGXQ8TBF5 258 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 FGF14Q92915 247 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 RNF38Q9H0F5 515 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 TRNAU1APQ9NX07 287 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ITGB1BP2Q9UKP3 347 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 NBASA2RRP1 2371 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 KPNA4O00629 521 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 HOXC11O43248 304 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PIAS1O75925 651 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 MT-CO3P00414 261 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 DBIP07108 87 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 UROSP10746 265 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CPOXP36551 454 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 EEF1A2Q05639 463 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 HLA-BQ31612 363 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 TTC33Q6PID6 262 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GATSQ8NAP1 163 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 OR9K2Q8NGE7 335 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PIWIL2Q8TC59 973 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ZPBPQ9BS86 351 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 DUSP26Q9BV47 211 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 TBC1D10AQ9BXI6 508 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 C6orf106Q9H6K1 298 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SMURF2Q9HAU4 748 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 IL1RAPQ9NPH3 570 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 BRD7Q9NPI1 651 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SEMA4GQ9NTN9 838 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SPATA7Q9P0W8 599 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 IFT52Q9Y366 437 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SAMHD1Q9Y3Z3 626 aaKnown RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PLSCR5A0PG75 271 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PLD2O14939 933 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PRODHO43272 600 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 BANF1O75531 89 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms