RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 BOLLQ8N9W6 283 aaKnown RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TWNKQ96RR1 684 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 FTSJ1Q9UET6 329 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TMEM98Q9Y2Y6 226 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 DPPA5A6NC42 116 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 PMM2O15305 246 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 GRID2O43424 1007 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 STATHP02808 62 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 VEGFBP49765 207 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 UBE2NP61088 152 aaKnown RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 GRK1Q15835 563 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TIGD6Q17RP2 521 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 RBM20Q5T481 1227 aaKnown RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 VWA5B1Q5TIE3 1220 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 ZC3H14Q6PJT7 736 aaKnown RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 OR8H3Q8N146 312 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF781Q8N8C0 355 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 ELP5Q8TE02 316 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 PYCR2Q96C36 320 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 PCYT2Q99447 389 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 C16orf70Q9BSU1 422 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 NMUR2Q9GZQ4 415 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 NUDT15Q9NV35 164 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TMEM184CQ9NVA4 438 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 HRASLS2Q9NWW9 162 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TAS2R9Q9NYW1 312 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 NLGN3Q9NZ94 848 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 TIMM8BQ9Y5J9 83 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 OR5K4A6NMS3 321 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 MTX2O75431 263 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 LPLP06858 475 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 POLR2CP19387 275 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 CHRNB4P30926 498 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 MCCD1P59942 119 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 RAB8AP61006 207 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 POU6F2P78424 691 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-208ENST00000428599 HSD11B2P80365 405 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 DSC3Q14574 896 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 SGCAQ16586 387 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 CHRFAM7AQ494W8 412 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 LYSMD3Q7Z3D4 306 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 CLNKQ7Z7G1 428 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 OR13C4Q8NGS5 318 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 OR1F2PQ96R84 312 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 C17orf62Q9BQA9 187 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 SLC22A4Q9H015 551 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF226Q9NYT6 803 aa8.65□□□□□ -1.02
CTNND1-208ENST00000428599 CLIC1O00299 241 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 MPPED1O15442 326 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 CDH1P12830 882 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 IFNGR1P15260 489 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 OR2B6P58173 313 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 SLC3A1Q07837 685 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 KIAA0895LQ68EN5 471 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 LRRC57Q8N9N7 239 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 PCDH19Q8TAB3 1148 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 FBXL18Q96ME1 805 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 POLDIP3Q9BY77 421 aaKnown RBP8.65□□□□□ -1.03
CTNND1-208ENST00000428599 EBF3Q9H4W6 596 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 PPP1R14DQ9NXH3 145 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 MS4A12Q9NXJ0 267 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 ACSL5Q9ULC5 683 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 NOP16Q9Y3C1 178 aaKnown RBP8.65□□□□□ -1.03
CTNND1-208ENST00000428599 ALS2Q96Q42 1657 aa8.65□□□□□ -1.03
CTNND1-208ENST00000428599 hCG_1807616A0A1W2PRN6 198 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 HCRTO43612 131 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 TMBIM6P55061 237 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 RPS21P63220 83 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 GTF2IRD2BQ6EKJ0 949 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 RAB12Q6IQ22 244 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 C22orf39Q6P5X5 142 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 GTF2IRD2Q86UP8 949 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 RBM15BQ8NDT2 890 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 NTAN1Q96AB6 310 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM209Q96SK2 561 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 SSU72Q9NP77 194 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 GIN1Q9NXP7 522 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 FARSAQ9Y285 508 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 IMPDH1P20839 514 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 IDH3AP50213 366 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 NPTX1Q15818 432 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 NANOS1Q8WY41 292 aaKnown RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 SH3YL1Q96HL8 342 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-208ENST00000428599 NEDD4LQ96PU5 975 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 MAPKAP1Q9BPZ7 522 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 KCNN3Q9UGI6 736 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 SCP2D1Q9UJQ7 156 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 SLC22A14Q9Y267 594 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 C2orf71A6NGG8 1288 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 ACTL6BO94805 426 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 PET100P0DJ07 73 aa8.64□□□□□ -1.03
CTNND1-208ENST00000428599 S1PR1P21453 382 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms