RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 RPF2Q9H7B2 306 aaKnown RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 FAM212BQ9NTI7 297 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 GDF2Q9UK05 429 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SDR42E2A6NKP2 422 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 H3BQ06 376 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 HRGP04196 525 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CCR1P32246 355 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 EPHA5P54756 1037 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 MLF1P58340 268 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PRR5P85299 388 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 UBAC2Q8NBM4 344 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CRLF2Q9HC73 371 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CD207Q9UJ71 328 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 H0YAE9 185 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 KLK1P06870 262 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SERPINA2P20848 420 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PRKCHP24723 683 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 TAS2R30P59541 319 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ZNF763Q0D2J5 394 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PDK1Q15118 436 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 TATDN3Q17R31 274 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SUPT20HL1Q3ZLR7 823 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 H3F3CQ6NXT2 135 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 NAA40Q86UY6 237 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 NAGSQ8N159 534 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SCML4Q8N228 414 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CHST4Q8NCG5 386 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 FBXO6Q9NRD1 293 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ANKARQ7Z5J8 1434 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SCN9AQ15858 1988 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 A0A1B0GTH6 734 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 AIFM1O95831 613 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 EPHA3P29320 983 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 HMGCS1Q01581 520 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 MEP1AQ16819 746 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CMIPQ8IY22 773 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 L3MBTL4Q8NA19 623 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 WACQ9BTA9 647 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 FBXO10Q9UK96 956 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 LMTK3Q96Q04 1460 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ZCCHC11Q5TAX3 1644 aaKnown RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 DRGXA6NNA5 263 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PRR5-ARHGAP8B1AHC4 643 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CCSO14618 274 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PMM2O15305 246 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CRYABP02511 175 aaKnown RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 PTBP1P26599 531 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■■■■ 33.3
LINC00649-203ENST00000427447 NPY2RP49146 381 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ZNF154Q13106 437 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 OTOP3Q7RTS5 596 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ZNF433Q8N7K0 673 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SIDT2Q8NBJ9 832 aaKnown RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 GAD1Q99259 594 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 CDC42EP4Q9H3Q1 356 aaKnown RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 GAL3ST2Q9H3Q3 398 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 ABI2Q9NYB9 513 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-203ENST00000427447 COPS7AQ9UBW8 275 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 SH2B3Q9UQQ2 575 aa7.56□□□□□ -1.2
LINC00649-203ENST00000427447 HELTA6NFD8 242 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 S100A3P33764 101 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 UBAP2LQ14157 1087 aaKnown RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 TMEM132DQ14C87 1099 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ZNF311Q5JNZ3 666 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 OR2G6Q5TZ20 316 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 TRIM40Q6P9F5 258 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 GBA3Q9H227 469 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ALG2Q9H553 416 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 KPTNQ9Y664 436 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ATG12O94817 140 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 HLA-DPB1P04440 258 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ITGAVP06756 1048 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 CTHP32929 405 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 RBMXP38159 391 aaKnown RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 CEBPAP49715 358 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 METAP1DQ6UB28 335 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 CHSY3Q70JA7 882 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 SLC47A1Q96FL8 570 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 SFRP2Q96HF1 295 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 KATNBL1Q9H079 304 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 MYEF2Q9P2K5 600 aaKnown RBP7.55□□□□□ -1.2
LINC00649-203ENST00000427447 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 RPA2P15927 270 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 IDUAP35475 653 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 MMP12P39900 470 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 TAS2R43P59537 309 aa7.55□□□□□ -1.2
LINC00649-203ENST00000427447 PKP1Q13835 747 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms