RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PQLC3Q8N755 202 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 FAM47BQ8NA70 645 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 NFKBIDQ8NI38 313 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 MIPOL1Q8TD10 442 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SLC26A7Q8TE54 656 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TRPC4APQ8TEL6 797 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TOP1MTQ969P6 601 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CLMNQ96JQ2 1002 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CNDP1Q96KN2 507 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 HSFY1Q96LI6 401 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SPATA33Q96N06 139 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PCYT2Q99447 389 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 VAT1Q99536 393 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 RBBP8Q99708 897 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SYT15Q9BQS2 421 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 HAUS8Q9BT25 410 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SPATA16Q9BXB7 569 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 IL22Q9GZX6 179 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SPATC1LQ9H0A9 340 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PDZD7Q9H5P4 517 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 DHX35Q9H5Z1 703 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 MRM3Q9HC36 420 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SPAG4Q9NPE6 437 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PPP1R14DQ9NXH3 145 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 DPP3Q9NY33 737 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 UPB1Q9UBR1 384 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 MARCOQ9UEW3 520 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CYTH4Q9UIA0 394 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SIX4Q9UIU6 781 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SLC25A13Q9UJS0 675 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 RAB26Q9ULW5 256 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PSMD13Q9UNM6 376 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CAMK2AQ9UQM7 478 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 LAMP3Q9UQV4 416 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CLDN16Q9Y5I7 305 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PSAT1Q9Y617 370 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 NYNRINQ9P2P1 1898 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 NLRC5Q86WI3 1866 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TRPM7Q96QT4 1865 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 A0A1W2PQM1 296 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 hCG_1807616A0A1W2PRN6 198 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TRPC5OSA6NMA1 111 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RNF103O00237 685 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 XPO1O14980 1071 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MFSD11O43934 449 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 C22orf31O95567 290 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HLA-DQA2P01906 255 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 URODP06132 367 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CHRM4P08173 479 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PABPC4LP0CB38 370 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 UBTFL6P0CB48 400 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HSPA1AP0DMV8 641 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HSPA1BP0DMV9 641 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 THRAP10827 490 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PSMA4P25789 261 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 EPHA8P29322 1005 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CDC25CP30307 473 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CPOXP36551 454 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 SULT1E1P49888 294 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CLCN3P51790 818 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MTTPP55157 894 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HDAC4P56524 1084 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RPL10AP62906 217 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 COG7P83436 770 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF33AQ06730 810 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PRKAA1Q13131 559 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 DPYSQ14117 519 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 FLOT2Q14254 428 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PRPSAP1Q14558 356 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 IL13RA2Q14627 380 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RFTN1Q14699 578 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TRIP10Q15642 601 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RPE65Q16518 533 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 AP5B1Q2VPB7 878 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MMEL1Q495T6 779 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 LRRC23Q53EV4 343 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MDH1BQ5I0G3 518 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 OGFRL1Q5TC84 451 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 IRAK1BP1Q5VVH5 260 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 SEL1L3Q68CR1 1132 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 NCBP2-AS2Q69YL0 99 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 SLC30A6Q6NXT4 461 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 NOTUMQ6P988 496 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CDHR3Q6ZTQ4 885 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RAPH1Q70E73 1250 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KRT74Q7RTS7 529 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TMEM110Q86TL2 294 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 LINC00523Q86TU6 105 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KLBQ86Z14 1044 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PGAM4Q8N0Y7 254 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 FBXW8Q8N3Y1 598 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MARVELD2Q8N4S9 558 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 GDPD5Q8WTR4 605 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 DDI1Q8WTU0 396 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RNF139Q8WU17 664 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KAT2AQ92830 837 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms