RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 HPDP32754 393 aaPredicted RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 EFNA3P52797 238 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 BTN3A2P78410 334 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 RASA2Q15283 850 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 LIPJQ5W064 366 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 TCTN3Q6NUS6 607 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 LAS2Q8IYD9 372 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 FDCSPQ8NFU4 85 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 FAR2Q96K12 515 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 VN1R1Q9GZP7 353 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 REXO4Q9GZR2 422 aaKnown RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 NOL11Q9H8H0 719 aaKnown RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 G3BP2Q9UN86 482 aaKnown RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 PCDHGA9Q9Y5G4 932 aaKnown RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 A0A0G2JN53 185 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 TLDC2A0PJX2 215 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 UGDHO60701 494 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 CDH16O75309 829 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 PDGFAP04085 211 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 GSTA1P08263 222 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 NUDT17P0C025 328 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 TAC1P20366 129 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 IL10P22301 178 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 ARL1P40616 181 aaPredicted RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 PLA2G16P53816 162 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 EEF1A2Q05639 463 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 RAPSNQ13702 412 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 ADPRMQ3LIE5 342 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 TRIM40Q6P9F5 258 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 PTRH1Q86Y79 214 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 GALNT16Q8N428 558 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 OR2L5Q8NG80 312 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 OR7G3Q8NG95 312 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 ZNF473Q8WTR7 871 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 ATP6V1E2Q96A05 226 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 NSUN5Q96P11 429 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 OR1F2PQ96R84 312 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 CLK4Q9HAZ1 481 aaKnown RBP17.02■□□□□ 0.32
HERC3-205ENST00000426683 PCTPQ9UKL6 214 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 CCDC88CQ9P219 2028 aa17.02■□□□□ 0.32
HERC3-205ENST00000426683 OR2W5A6NFC9 320 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 OR7A17O14581 309 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 PCDH17O14917 1159 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 GLRA3O75311 464 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 CDC123O75794 336 aaPredicted RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 HPP00738 406 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 FHP07954 510 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 RPS17P08708 135 aaKnown RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 C8orf89P0DMQ9 161 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 COX6A1P12074 109 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 SERPINB1P30740 379 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 PGDP52209 483 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 IFFO1Q0D2I5 559 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 AIMP2Q13155 320 aaKnown RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 DDX39BQ13838 428 aaKnown RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 TMEM205Q6UW68 189 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 SH2D5Q6ZV89 423 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 ASB18Q6ZVZ8 466 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 METTL21AQ8WXB1 218 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 TBC1D20Q96BZ9 403 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 CDK15Q96Q40 435 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 F2RL3Q96RI0 385 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 NUDT9Q9BW91 350 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 MS4A8Q9BY19 250 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 ZNF160Q9HCG1 818 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 ZBTB26Q9HCK0 441 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 MLXIPLQ9NP71 852 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 SEMA4BQ9NPR2 832 aaPredicted RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 LANCL2Q9NS86 450 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 GPR83Q9NYM4 423 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 RNF11Q9Y3C5 154 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 PCDHGA11Q9Y5H2 935 aa17.01■□□□□ 0.31
HERC3-205ENST00000426683 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
HERC3-205ENST00000426683 LOC102723996A0A087X1L8 192 aa17■□□□□ 0.31
HERC3-205ENST00000426683 A0A088AWK7 358 aa17■□□□□ 0.31
HERC3-205ENST00000426683 NSG1A0A0A6YYJ2 146 aa17■□□□□ 0.31
HERC3-205ENST00000426683 B8ZZF3 427 aa17■□□□□ 0.31
HERC3-205ENST00000426683 SH3BGRLO75368 114 aa17■□□□□ 0.31
HERC3-205ENST00000426683 CLDN9O95484 217 aa17■□□□□ 0.31
HERC3-205ENST00000426683 TGFB1P01137 390 aa17■□□□□ 0.31
HERC3-205ENST00000426683 CYC1P08574 325 aa17■□□□□ 0.31
HERC3-205ENST00000426683 ZNF10P21506 573 aaPredicted RBP17■□□□□ 0.31
HERC3-205ENST00000426683 ITGA3P26006 1051 aa17■□□□□ 0.31
HERC3-205ENST00000426683 ATRXP46100 2492 aa17■□□□□ 0.31
HERC3-205ENST00000426683 CCNG1P51959 295 aa17■□□□□ 0.31
HERC3-205ENST00000426683 TGM3Q08188 693 aa17■□□□□ 0.31
HERC3-205ENST00000426683 MYBPC3Q14896 1274 aa17■□□□□ 0.31
HERC3-205ENST00000426683 CPSF6Q16630 551 aaKnown RBP eCLIP17■□□□□ 0.31
HERC3-205ENST00000426683 ABHD17CQ6PCB6 329 aa17■□□□□ 0.31
HERC3-205ENST00000426683 RPS27LQ71UM5 84 aaKnown RBP17■□□□□ 0.31
HERC3-205ENST00000426683 NDUFAF7Q7L592 441 aa17■□□□□ 0.31
HERC3-205ENST00000426683 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
HERC3-205ENST00000426683 CA13Q8N1Q1 262 aa17■□□□□ 0.31
HERC3-205ENST00000426683 L3MBTL4Q8NA19 623 aa17■□□□□ 0.31
HERC3-205ENST00000426683 OR52B6Q8NGF0 335 aa17■□□□□ 0.31
HERC3-205ENST00000426683 HUS1BQ8NHY5 278 aa17■□□□□ 0.31
HERC3-205ENST00000426683 ZNF483Q8TF39 744 aaPredicted RBP17■□□□□ 0.31
HERC3-205ENST00000426683 REPS1Q96D71 796 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms