RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ZC3H14Q6PJT7 736 aaKnown RBP14.4□□□□□ -0.1
GINS3-203ENST00000426538 RNF44Q7L0R7 432 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 VN1R4Q7Z5H5 301 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 PLXDC1Q8IUK5 500 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 FBXW8Q8N3Y1 598 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 MINDY1Q8N5J2 469 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 DPP10Q8N608 796 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 Q8N9G6 341 aaPredicted RBP14.4□□□□□ -0.1
GINS3-203ENST00000426538 C19orf47Q8N9M1 422 aaKnown RBP14.4□□□□□ -0.1
GINS3-203ENST00000426538 VPS37AQ8NEZ2 397 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 OR7A2PQ8NGA2 310 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 NT5CQ8TCD5 201 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 TM4SF19Q96DZ7 209 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 TCTN2Q96GX1 697 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 CCDC3Q9BQI4 270 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 ZNF717Q9BY31 904 aaPredicted RBP14.4□□□□□ -0.1
GINS3-203ENST00000426538 SLC6A16Q9GZN6 736 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 REEP4Q9H6H4 257 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 DDX31Q9H8H2 851 aaKnown RBP14.4□□□□□ -0.1
GINS3-203ENST00000426538 MYNNQ9NPC7 610 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 SPAG4Q9NPE6 437 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 SH3BP4Q9P0V3 963 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 PCDHGA5Q9Y5G8 931 aa14.4□□□□□ -0.1
GINS3-203ENST00000426538 A0A0G2JN53 185 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 TLCD2A6NGC4 264 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 GABRR3A8MPY1 467 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 H0YGG7 62 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 ZSCAN9O15535 394 aaPredicted RBP14.39□□□□□ -0.11
GINS3-203ENST00000426538 MYF5P13349 255 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 GSTM5P46439 218 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 NUBP1P53384 320 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 ARF3P61204 181 aaPredicted RBP14.39□□□□□ -0.11
GINS3-203ENST00000426538 ELF3P78545 371 aaPredicted RBP14.39□□□□□ -0.11
GINS3-203ENST00000426538 PLIN5Q00G26 463 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 FOXM1Q08050 763 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 SLC9A5Q14940 896 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 HEPACAMQ14CZ8 416 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 UGT8Q16880 541 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 AMZ1Q400G9 498 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 MANEAQ5SRI9 462 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 FRMPD2BQ6IN97 320 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 IKBIPQ70UQ0 350 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 UBE3DQ7Z6J8 389 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 KCT2Q8NC54 265 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 FAM13CQ8NE31 585 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 OR8J2Q8NGG1 315 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.39□□□□□ -0.113e-10■■■■■ 90.2
GINS3-203ENST00000426538 ITCHQ96J02 903 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 CD180Q99467 661 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 NLNQ9BYT8 704 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 COPS7BQ9H9Q2 264 aaPredicted RBP14.39□□□□□ -0.11
GINS3-203ENST00000426538 LHX9Q9NQ69 397 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 MIEF1Q9NQG6 463 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 ATAD3AQ9NVI7 634 aa14.39□□□□□ -0.11
GINS3-203ENST00000426538 LOC105369274A0A096LPK9 316 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 LOC102723532A0A0G2JNH3 316 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 CPED1A4D0V7 1026 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 TNFRSF10AO00220 468 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 KHNYNO15037 678 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 B4GAT1O43505 415 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 RASSF9O75901 435 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 EPN2O95208 641 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 IL3P08700 152 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PNLIPP16233 465 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 RAB8AP61006 207 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 NR1D2Q14995 579 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SUZ12Q15022 739 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 CCDC6Q16204 474 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 FAM71E1Q6IPT2 247 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 MSANTD1Q6ZTZ1 278 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 DHDDSQ86SQ9 333 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 OR4N4Q8N0Y3 316 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 EID2Q8N6I1 236 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 DNAJB8Q8NHS0 232 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 GTF2H4Q92759 462 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 GAL3ST3Q96A11 431 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 MTERF3Q96E29 417 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SLC39A3Q9BRY0 314 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 DUSP26Q9BV47 211 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 AICDAQ9GZX7 198 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SYNPO2LQ9H987 977 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SLAMF8Q9P0V8 285 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 KLHL3Q9UH77 587 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 R4GN57 208 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 ADAMTS9Q9P2N4 1935 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 KIF1CO43896 1103 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 GUCY1B2O75343 617 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PDE5AO76074 875 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 KLHL18O94889 574 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 ENGP17813 658 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 DDX5P17844 614 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 ZNF10P21506 573 aaPredicted RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 HIST1H1TP22492 207 aaPredicted RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 MTTPP55157 894 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms