RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 CBLL1Q75N03 491 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 NLGN4YQ8NFZ3 816 aaPredicted RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PSKH2Q96QS6 385 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 ANKHQ9HCJ1 492 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 OLA1Q9NTK5 396 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 UCKL1Q9NWZ5 548 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 CRLS1Q9UJA2 301 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 A8MUA0 341 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 SEPT4O43236 478 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 TPST2O60704 377 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PRAMEF4O60810 478 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 IL12RB1P42701 662 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 RUNX1T1Q06455 604 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PRAMEF9Q5VWM5 478 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 RFLNAQ6ZTI6 216 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 ATCAYQ86WG3 371 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 DEDD2Q8WXF8 326 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 RNF170Q96K19 258 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 FAM129BQ96TA1 746 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PKP4Q99569 1192 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 COMMD3Q9UBI1 195 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 ERVW-1Q9UQF0 538 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PCDHGB3Q9Y5G1 929 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.96□□□□□ -0.34
LRCH3-203ENST00000425562 A0A1W2PQL4 384 aaPredicted RBP12.96□□□□□ -0.34
LRCH3-203ENST00000425562 FABP12A6NFH5 140 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 ENTPD6O75354 484 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 IGLV3-27P01718 113 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 APEX1P27695 318 aaKnown RBP12.96□□□□□ -0.34
LRCH3-203ENST00000425562 ATP5C1P36542 298 aaKnown RBP12.96□□□□□ -0.34
LRCH3-203ENST00000425562 KIR2DL3P43628 341 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 OR3A3P47888 321 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 MAPKAPK2P49137 400 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 SLC11A1P49279 550 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 HYAL2Q12891 473 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 ZNF177Q13360 481 aaPredicted RBP12.96□□□□□ -0.34
LRCH3-203ENST00000425562 DUOXA1Q1HG43 343 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 PITX2Q99697 317 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 FNIP2Q9P278 1114 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 NLKQ9UBE8 527 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.34
LRCH3-203ENST00000425562 A0A1B0GVC2 190 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 C2orf78A6NCI8 922 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 A6NIN4 97 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 B4DXG7 233 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 COCHO43405 550 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 PRKACBP22694 351 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 ARF5P84085 180 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 AQP11Q8NBQ7 271 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 ATP6V1C2Q8NEY4 427 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 OPALINQ96PE5 141 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 P2RY12Q9H244 342 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 HHATLQ9HCP6 504 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 PCDHGA2Q9Y5H1 932 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 GBF1Q92538 1859 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 CHD5Q8TDI0 1954 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 HMX3A6NHT5 357 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 H3BN98 237 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 H3BNC9 293 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 POU3F3P20264 500 aaPredicted RBP12.95□□□□□ -0.34
LRCH3-203ENST00000425562 GPC1P35052 558 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TIE1P35590 1138 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TATDN3Q17R31 274 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
LRCH3-203ENST00000425562 MPPE1Q53F39 396 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 IER5LQ5T953 404 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 B3GLCTQ6Y288 498 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 ZBTB2Q8N680 514 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 BCL7CQ8WUZ0 217 aaPredicted RBP12.95□□□□□ -0.34
LRCH3-203ENST00000425562 PIH1D2Q8WWB5 315 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 NARFLQ9H6Q4 476 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 ZNF556Q9HAH1 456 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TMPRSS11EQ9UL52 423 aa12.95□□□□□ -0.34
LRCH3-203ENST00000425562 TRBC1P01850 177 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 CSF3P09919 207 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 ZNF7P17097 686 aaPredicted RBP12.94□□□□□ -0.34
LRCH3-203ENST00000425562 ITGA2P17301 1181 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 FKBP1BP68106 108 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 IQCCQ4KMZ1 466 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 SHFQ7M4L6 423 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 ADGRE3Q9BY15 652 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 POLR2J2Q9GZM3 115 aaKnown RBP12.94□□□□□ -0.34
LRCH3-203ENST00000425562 MARCH5Q9NX47 278 aa12.94□□□□□ -0.34
LRCH3-203ENST00000425562 CRNNQ9UBG3 495 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms