RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SRSF5Q13243 272 aaKnown RBP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 PRAMEF14Q5SWL7 426 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 C6orf141Q5SZD1 244 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 PRAMEF13Q5VWM6 474 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 VN1R5Q7Z5H4 357 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 TMEM145Q8NBT3 493 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 C16orf78Q8WTQ4 265 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 MYADMQ96S97 322 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 NKX2-4Q9H2Z4 354 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 SYNPO2LQ9H987 977 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 PTTG2Q9NZH5 202 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 GMPPBQ9Y5P6 360 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 EFCAB14O75071 495 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 KLHL18O94889 574 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 C1GALT1C1LP0DN25 315 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 MAGP20916 626 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 SPIBQ01892 262 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 DUSP7Q16829 419 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 LIPJQ5W064 366 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 GRHL2Q6ISB3 625 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 CLIP4Q8N3C7 705 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 PREBQ9HCU5 417 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 DPP7Q9UHL4 492 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 KRBA1A5PL33 1030 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 PCDH17O14917 1159 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 FRS3O43559 492 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 APOL3O95236 402 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 EML2O95834 649 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ANGPTL1O95841 491 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 CRHBPP24387 322 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 MAPK1P28482 360 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 VBP1P61758 197 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 HOXC5Q00444 222 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ATG9BQ674R7 924 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 CALHM3Q86XJ0 350 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 SPARTQ8N0X7 666 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 TTC29Q8NA56 475 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 OR56A3Q8NH54 315 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 COL26A1Q96A83 441 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 FEVQ99581 238 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 NIPSNAP1Q9BPW8 284 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ALOXE3Q9BYJ1 711 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 DMRT3Q9NQL9 472 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 KRT84Q9NSB2 600 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 LMCD1Q9NZU5 365 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 FBXW2Q9UKT8 454 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 DOLKQ9UPQ8 538 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ORC6Q9Y5N6 252 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 STON1Q9Y6Q2 735 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 DOCK8Q8NF50 2099 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 PNMA8CA0A1B0GUJ8 204 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SLC9A3R1O14745 358 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SUV39H1O43463 412 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 LCKP06239 509 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 BCHEP06276 602 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 HSMCR30P0CW71 290 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 PPM1FP49593 454 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CRISP3P54108 245 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CDK3Q00526 305 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 RUNX3Q13761 415 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SPDYE7PQ495Y7 208 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 LRIF1Q5T3J3 769 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 NXPE4Q6UWF7 544 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 TRIM73Q86UV7 250 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CCDC71Q8IV32 467 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 ADGRF3Q8IZF5 1079 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 TCAIMQ8N3R3 496 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 ZCCHC7Q8N3Z6 543 aaKnown RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 LINC01555Q8NAE3 123 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 GLMNQ92990 594 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 FBXL12Q9NXK8 326 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 TRPC4Q9UBN4 977 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 A0A1W2PRB8 838 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 POM121BA6NF01 834 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 PLPP1O14494 284 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 NFATC1O95644 943 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 RANBP1P43487 201 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CDK9P50750 372 aaKnown RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 ID2Q02363 134 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 ATP1A4Q13733 1029 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SPCS2Q15005 226 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 OR4N5Q8IXE1 308 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 DEFB119Q8N690 84 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SLC5A8Q8N695 610 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 SIMC1Q8NDZ2 872 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CHTF18Q8WVB6 975 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 XAGE5Q8WWM1 108 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 PATE1Q8WXA2 126 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 RELTQ969Z4 430 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 TSACCQ96A04 125 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-204ENST00000423636 FAM83CQ9BQN1 747 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 CXorf36Q9H7Y0 433 aa11.41□□□□□ -0.58
PTPRN-204ENST00000423636 EDDM13A0A1B0GTR0 161 aa11.4□□□□□ -0.58
PTPRN-204ENST00000423636 FAM220BPB1ANY3 271 aa11.4□□□□□ -0.58
PTPRN-204ENST00000423636 HYAL3O43820 417 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms