RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ALDOAP04075 364 aaKnown RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 MRPL3P09001 348 aaKnown RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 HOXD12P35452 270 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 GTF2IRD2BQ6EKJ0 949 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 PNCKQ6P2M8 343 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 GTF2IRD2Q86UP8 949 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 AMZ2Q86W34 360 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 UBQLNLQ8IYU4 475 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 TMEM145Q8NBT3 493 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 GNPDA2Q8TDQ7 276 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 MEAF6Q9HAF1 191 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 COPS7AQ9UBW8 275 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 CENPBD1B2RD01 187 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 E7EQ34 232 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 SLC1A7O00341 560 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 PCDH17O14917 1159 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 AGR2O95994 175 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 GTF2F2P13984 249 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 RPS24P62847 133 aaKnown RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 C6orf136Q5SQH8 315 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 TTLQ8NG68 377 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 JSRP1Q96MG2 331 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 ZNF599Q96NL3 588 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 CRYZL1O95825 349 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 CXCR1P25024 350 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 BDKRB1P46663 353 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 VARS2Q5ST30 1063 aaKnown RBP11.95□□□□□ -0.5
CLCN4-203ENST00000421085 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 SGCDQ92629 289 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 ADAM7Q9H2U9 754 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
CLCN4-203ENST00000421085 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 RFC2P35250 354 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 SLC6A9P48067 706 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 RPS13P62277 151 aaKnown RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 MTFR2Q6P444 385 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 RAB11FIP2Q7L804 512 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 OR13J1Q8NGT2 312 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 TSPEARQ8WU66 669 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CD244Q9BZW8 370 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 IFT52Q9Y366 437 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PTTG1O95997 202 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 SCNN1AP37088 669 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 FADDQ13158 208 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ENPP2Q13822 863 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 EXOC3L2Q2M3D2 409 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PRICKLE1Q96MT3 831 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ZNF649Q9BS31 505 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ABCG5Q9H222 651 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 MTG2Q9H4K7 406 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NLGN3Q9NZ94 848 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ERI3O43414 337 aaKnown RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CBSLP0DN79 551 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PRKACBP22694 351 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PROZP22891 400 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 UQCRC1P31930 480 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CBSP35520 551 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 STC1P52823 247 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 RIPPLY1Q0D2K3 151 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 COL28A1Q2UY09 1125 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 AADACL4Q5VUY2 407 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ATG9BQ674R7 924 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 MFSD8Q8NHS3 518 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ZNF486Q96H40 463 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 HTR3EA5X5Y0 456 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PRKACAP17612 351 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ACVRL1P37023 503 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ADH7P40394 386 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NR4A2P43354 598 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PTCHD3Q3KNS1 767 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 KRTCAP2Q8N6L1 136 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ABHD11Q8NFV4 315 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 OR8K3Q8NH51 312 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 A0A1W2PPK0 400 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 KRBA1A5PL33 1030 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 AGAP5A6NIR3 686 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 WASH3PC4AMC7 463 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 SYN3O14994 580 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 FGF19O95750 216 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 STATHP02808 62 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 CHMP24386 653 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 ANKRD54Q6NXT1 300 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PSD4Q8NDX1 1056 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 NSUN5Q96P11 429 aaKnown RBP11.94□□□□□ -0.5
CLCN4-203ENST00000421085 PSKH2Q96QS6 385 aa11.94□□□□□ -0.5
CLCN4-203ENST00000421085 SLA2Q9H6Q3 261 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms