RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FAM170BA6NMN3 283 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 KANTRA0A1W2PQU2 76 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 M0R129 80 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 CAPN5O15484 640 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-205ENST00000418258 COCHO43405 550 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 SCO2O43819 266 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 CDK6Q00534 326 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 DSG2Q14126 1118 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 FAM69BQ5VUD6 431 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 MND1Q9BWT6 205 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 PCDHAC1Q9H158 963 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 MS4A12Q9NXJ0 267 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
PTCH1-205ENST00000418258 C13orf42A0A1B0GVH6 325 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 C6orf47O95873 294 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 HRGP04196 525 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 CBLBQ13191 982 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TMED4Q7Z7H5 227 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TMEM41AQ96HV5 264 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 PRODH2Q9UF12 536 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 REXO2Q9Y3B8 237 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SHROOM3Q8TF72 1996 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 FZD9O00144 591 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SOCS5O75159 536 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SPARCP09486 303 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 MAGEA12P43365 314 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 GNG2P59768 71 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 PMS2P3Q13401 168 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 UNQ6126/PRO20091Q6UXV3 157 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 LINC00471Q8N535 108 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 DCAF4L2Q8NA75 395 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 AMBNQ9NP70 447 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 GALPQ9UBC7 116 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC7A11Q9UPY5 501 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 RNF11Q9Y3C5 154 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 A6NLC8 198 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 HEPACAM2A8MVW5 462 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 RNGTTO60942 597 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 VAMP1P23763 118 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 EIF2S3LQ2VIR3 472 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 PAQR7Q86WK9 346 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC44A3Q8N4M1 653 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 MINDY3Q9H8M7 445 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SPHK2Q9NRA0 654 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 CLDN25C9JDP6 229 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TOR1BO14657 336 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 PEX2P28328 305 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ASB18Q6ZVZ8 466 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF550Q7Z398 422 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 UBQLNLQ8IYU4 475 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TTTY10Q9BZA0 68 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC2A2P11168 524 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 OR4D2P58180 307 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 POU6F2P78424 691 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SERINC3Q13530 473 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 C1orf61Q13536 156 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TPRG1LQ5T0D9 272 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZC3H14Q6PJT7 736 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 USB1Q9BQ65 265 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TMEM248Q9NWD8 314 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 OXSMQ9NWU1 459 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 HPF1Q9NWY4 346 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 WRAP73Q9P2S5 460 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC2A6Q9UGQ3 507 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 BAIAP2Q9UQB8 552 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 MYOCOSA0A1B0GUC4 107 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ETV3P41162 512 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC15A1P46059 708 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 KCNC1P48547 511 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 RPS3AP61247 264 aaKnown RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 MEF2AQ02078 507 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLAMF1Q13291 335 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 GPR17Q13304 367 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF542PQ5EBM4 170 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 SLC35F1Q5T1Q4 408 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 OGFRL1Q5TC84 451 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF283Q8N7M2 679 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 C12orf76Q8N812 135 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF641Q96N77 438 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TXNRD2Q9NNW7 524 aa10.84□□□□□ -0.67
PTCH1-205ENST00000418258 TEX13DA0A0J9YY54 714 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 ACOT7O00154 380 aa10.83□□□□□ -0.68
PTCH1-205ENST00000418258 CD36P16671 472 aa10.83□□□□□ -0.68
PTCH1-205ENST00000418258 PTCHD3Q3KNS1 767 aa10.83□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF648Q5T619 568 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 SHKBP1Q8TBC3 707 aa10.83□□□□□ -0.68
PTCH1-205ENST00000418258 APOBEC3BQ9UH17 382 aaKnown RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 RBMX2Q9Y388 322 aaKnown RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 FAM208AQ9UK61 1670 aaKnown RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF638Q14966 1978 aaKnown RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 IGLON5A6NGN9 336 aa10.83□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF99A8MXY4 864 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-205ENST00000418258 OR2B3O76000 313 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms