RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 NCCRP1Q6ZVX7 275 aaPredicted RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 FAM83FQ8NEG4 500 aaPredicted RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF675Q8TD23 568 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 BTN2A2Q8WVV5 523 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 SPASTQ9UBP0 616 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PCDHGA2Q9Y5H1 932 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 HCFC2Q9Y5Z7 792 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PRAMEF33A0A0G2JMD5 474 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 A8MU76 341 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 DSCR3O14972 297 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 KDM1AO60341 852 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 PRAMEF10O60809 474 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 TNFRSF21O75509 655 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CATP04040 527 aaKnown RBP13.89□□□□□ -0.19
HDAC9-208ENST00000417496 C8AP07357 584 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 TYRP14679 529 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 NPPBP16860 134 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 ASMTP46597 345 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 PPP5CP53041 499 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 ST3GAL4Q11206 333 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 FADDQ13158 208 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 SCARB2Q14108 478 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 DOC2BQ14184 412 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 ANXA8L1Q5VT79 327 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CLIP4Q8N3C7 705 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 Q96MT0 163 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CHCHD6Q9BRQ6 235 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CCM2Q9BSQ5 444 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 BRF2Q9HAW0 419 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 MS4A12Q9NXJ0 267 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 KCNE2Q9Y6J6 123 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CDK1P06493 297 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CTSKP43235 329 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 TMED10P49755 219 aaKnown RBP13.89□□□□□ -0.19
HDAC9-208ENST00000417496 TBPL1P62380 186 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 KCNC3Q14003 757 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 SLBPQ14493 270 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDAC9-208ENST00000417496 NEK10Q6ZWH5 1172 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
HDAC9-208ENST00000417496 CFAP206Q8IYR0 622 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 OR56A3Q8NH54 315 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 GIN1Q9NXP7 522 aa13.89□□□□□ -0.19
HDAC9-208ENST00000417496 SLC5A10A0PJK1 596 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 RNASET2O00584 256 aaKnown RBP13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ADAMDEC1O15204 470 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ATG13O75143 517 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 KLHL18O94889 574 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 KLK1P06870 262 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ADORA3P0DMS8 318 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 POU1F1P28069 291 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 C21orf58P58505 322 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 TAS2R50P59544 299 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 RPS26P62854 115 aaKnown RBP13.88□□□□□ -0.19
HDAC9-208ENST00000417496 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 MICAQ29983 383 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 SPIN4Q56A73 249 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 STEAP3Q658P3 488 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 MED27Q6P2C8 311 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 BRAT1Q6PJG6 821 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF605Q86T29 641 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 LYSMD2Q8IV50 215 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 CACTIN-AS1Q8N1I8 211 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 STX19Q8N4C7 294 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 OR4C15Q8NGM1 316 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ATL1Q8WXF7 558 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 GLYATL1Q969I3 302 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 KLHL25Q9H0H3 589 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 REEP4Q9H6H4 257 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF282Q9UDV7 671 aaPredicted RBP13.88□□□□□ -0.19
HDAC9-208ENST00000417496 RAB23Q9ULC3 237 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 RBMX2Q9Y388 322 aaKnown RBP13.88□□□□□ -0.19
HDAC9-208ENST00000417496 K7ESM1 405 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 SOAT1P35610 550 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 TLE2Q04725 743 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF763Q0D2J5 394 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 DUSP7Q16829 419 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 ARMCX4Q5H9R4 360 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 LY6G5CQ5SRR4 150 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 HOMEZQ8IX15 550 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 MYDGFQ969H8 173 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 AP2M1Q96CW1 435 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 OR5M11Q96RB7 305 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 CDADC1Q9BWV3 514 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 C1GALT1Q9NS00 363 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 SNX8Q9Y5X2 465 aa13.88□□□□□ -0.19
HDAC9-208ENST00000417496 METTL15A6NJ78 407 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 H3BM21 787 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CNOT3O75175 753 aaKnown RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF30P17039 623 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 XPAP23025 273 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms