RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 METTL25Q8N6Q8 603 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CCDC185Q8N715 623 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SYT14Q8NB59 555 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 FAM83FQ8NEG4 500 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ENGASEQ8NFI3 743 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PROKR2Q8NFJ6 384 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 RHEBL1Q8TAI7 183 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PHOSPHO2Q8TCD6 241 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 NETO1Q8TDF5 533 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 TMEM170AQ8WVE7 144 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SPRYD4Q8WW59 207 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 LINC01599Q8WXQ3 324 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ARNTL2Q8WYA1 636 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 HAS2Q92819 552 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 GGHQ92820 318 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 TOP1MTQ969P6 601 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SLC35B4Q969S0 331 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PTCD3Q96EY7 689 aaKnown RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 STAMBPL1Q96FJ0 436 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ZNF514Q96K75 400 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 LRR1Q96L50 414 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 HSPA12BQ96MM6 686 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 DCLRE1CQ96SD1 692 aaKnown RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 MED10Q9BTT4 135 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 WRAP53Q9BUR4 548 aaKnown RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 IFT27Q9BW83 186 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 UPF3BQ9BZI7 483 aaKnown RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 STRADBQ9C0K7 418 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 WWTR1Q9GZV5 400 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SPRTNQ9H040 489 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 KATNBL1Q9H079 304 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PPIL3Q9H2H8 161 aaKnown RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ELOVL6Q9H5J4 265 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CDCP1Q9H5V8 836 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CNGB3Q9NQW8 809 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 DYRK4Q9NR20 520 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 TUBG2Q9NRH3 451 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 UPB1Q9UBR1 384 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CTNNAL1Q9UBT7 734 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PISDQ9UG56 409 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SLC7A8Q9UHI5 535 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CCNL1Q9UK58 526 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 RPH3ALQ9UNE2 315 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SORCS3Q9UPU3 1222 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 DTX4Q9Y2E6 619 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 SIT1Q9Y3P8 196 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 KLF2Q9Y5W3 355 aaPredicted RBP2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 CEPT1Q9Y6K0 416 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ZHX2Q9Y6X8 837 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 V9GYQ6 96 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 ZMYM3Q14202 1370 aa2.98□□□□□ -1.93
CTDSPL-203ENST00000416688 PLB1Q6P1J6 1458 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 ELP1O95163 1332 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 MAP3K15Q6ZN16 1313 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 PPIAL4EA0A075B759 164 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 LOC105371242A0A075B767 164 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TRBV11-1A0A0K0K1C0 115 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CCDC195A0A1B0GUA6 201 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 FAM95CA0A1B0GW59 222 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 A0A1W2PPQ1 181 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 A0A1W2PS29 197 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 C1orf226A1L170 272 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 FAM90A10PA6NDY2 464 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 FBLL1A6NHQ2 334 aaKnown RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 H3BS24 57 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 H7C1Q1 480 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 FOXE1O00358 373 aaPredicted RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CLDN5O00501 218 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TOR1AO14656 332 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 KLF11O14901 512 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CYP27B1O15528 508 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 KDELR3O43731 214 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TIMM8AO60220 97 aaPredicted RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 OR10H2O60403 315 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TPST2O60704 377 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 SCN2BO60939 215 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CREG1O75629 220 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 BAG3O95817 575 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TSPAN12O95859 305 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 IFNA14P01570 189 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 PRNPP04156 253 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 APRTP07741 180 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 SERPINA6P08185 405 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 PNMA6AP0CW24 399 aaPredicted RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 PPIAL4FP0DN26 164 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 EIF2S2P20042 333 aaKnown RBP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 RAB4AP20338 218 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 GCSHP23434 173 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 DDX6P26196 483 aaKnown RBP eCLIP2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 IL12BP29460 328 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 HMOX2P30519 316 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CASP14P31944 242 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 HMGCLP35914 325 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 LIPAP38571 399 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 ARL4AP40617 200 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 CDKN2CP42773 168 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 TNFRSF4P43489 277 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 ACADSBP45954 432 aa2.97□□□□□ -1.93
CTDSPL-203ENST00000416688 SLC6A8P48029 635 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms