RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TBC1D20Q96BZ9 403 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 SIGLEC12Q96PQ1 595 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 OLAHQ9NV23 265 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 OSGIN2Q9Y236 505 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 CLDN16Q9Y5I7 305 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
UBXN4-203ENST00000416538 CENPEQ02224 2701 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 A8MUI8 341 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 FAM227AF5H4B4 570 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 TGFBR3LH3BV60 316 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 EIF3HO15372 352 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 B4GALT2O60909 372 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 UQCRHP07919 91 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 EPORP19235 508 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 MAOAP21397 527 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 HNRNPFP52597 415 aaKnown RBP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 SLC26A5P58743 744 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 POU4F1Q01851 419 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 DLG1Q12959 904 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 ELOAQ14241 798 aaKnown RBP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 SLBPQ14493 270 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 INAQ16352 499 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 ABHD17BQ5VST6 288 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF787Q6DD87 383 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 SYT10Q6XYQ8 523 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 FRA10AC1Q70Z53 315 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 MAMDC2Q7Z304 686 aaPredicted RBP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 CMC1Q7Z7K0 106 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 CA13Q8N1Q1 262 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 BBOF1Q8ND07 529 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 FBXO25Q8TCJ0 367 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 C5orf34Q96MH7 638 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 AIF1LQ9BQI0 150 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBXN4-203ENST00000416538 MMP25Q9NPA2 562 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 NECTIN3Q9NQS3 549 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 ANKRD10Q9NXR5 420 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 NSMCE4AQ9NXX6 385 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 KCNE2Q9Y6J6 123 aa14.18□□□□□ -0.14
UBXN4-203ENST00000416538 NDC80O14777 642 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 PRAMEF2O60811 474 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 CCDC166P0CW27 439 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 ICAM2P13598 275 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 GP5P40197 560 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 KCNC1P48547 511 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 HSPA7P48741 367 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 HNMTP50135 292 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 CALCOCO2Q13137 446 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 TUBA3CQ13748 450 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 RBBP5Q15291 538 aaKnown RBP14.17□□□□□ -0.14
UBXN4-203ENST00000416538 KBTBD12Q3ZCT8 623 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 C4orf17Q53FE4 359 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 ACER2Q5QJU3 275 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF468Q5VIY5 522 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-203ENST00000416538 TUBA3EQ6PEY2 450 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 QSOX2Q6ZRP7 698 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 ABHD13Q7L211 337 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 TMEM52Q8NDY8 209 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 UBXN10Q96LJ8 280 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 LPAR4Q99677 370 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 CPNE1Q99829 537 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 KCNK13Q9HB14 408 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 COPG2Q9UBF2 871 aa14.17□□□□□ -0.14
UBXN4-203ENST00000416538 TCRBV16S1A1N1A0A5B0 115 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 ESYT3A0FGR9 886 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 LRRTM2O43300 516 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 SERPINA6P08185 405 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 STSP08842 583 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 SLC35E2BP0CK96 405 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 C1GALT1C1LP0DN25 315 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 IL10P22301 178 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 PLTPP55058 493 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 OR4D2P58180 307 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
UBXN4-203ENST00000416538 RUNX2Q13950 521 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 EXT1Q16394 746 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF572Q7Z3I7 529 aaPredicted RBP14.16□□□□□ -0.14
UBXN4-203ENST00000416538 PDPRQ8NCN5 879 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 NFAM1Q8NET5 270 aaPredicted RBP14.16□□□□□ -0.14
UBXN4-203ENST00000416538 TRPV3Q8NET8 790 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 M1APQ8TC57 530 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 ELP5Q8TE02 316 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 EXT2Q93063 718 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 MS4A6EQ96DS6 147 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 QRFPRQ96P65 431 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 RHBGQ9H310 441 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 STMN3Q9NZ72 180 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 WWOXQ9NZC7 414 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 ABI3Q9P2A4 366 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 CRYBG3Q68DQ2 2970 aa14.16□□□□□ -0.14
UBXN4-203ENST00000416538 SAGE2PA6NJ88 616 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 GABRR3A8MPY1 467 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZG16O60844 167 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 RNH1P13489 461 aaKnown RBP14.15□□□□□ -0.14
UBXN4-203ENST00000416538 STMN1P16949 149 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 GNAZP19086 355 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 JAK1P23458 1154 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 PPP2R1BP30154 601 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 GGT5P36269 586 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms