RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SEC14L1Q92503 715 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 KCNA7Q96RP8 456 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 DPH7Q9BTV6 452 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CXorf21Q9HAI6 301 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ING3Q9NXR8 418 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 DKKL1Q9UK85 242 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 IQCMA0A1B0GVH7 501 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 AK1P00568 194 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 RLN1P04808 185 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 SLC7A9P82251 487 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ZNF33BQ06732 778 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 TRAM2Q15035 370 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 OR52E8Q6IFG1 317 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 TTC9BQ8N6N2 239 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 OR8J3Q8NGG0 315 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 OR5T3Q8NGG3 340 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 KLF16Q9BXK1 252 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-202ENST00000413872 HBQ1P09105 142 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 RPS3P23396 243 aaKnown RBP eCLIP16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CDKN1CP49918 316 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-202ENST00000413872 VBP1P61758 197 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 TCTE1Q5JU00 501 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ATG9BQ674R7 924 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ARHGAP22Q7Z5H3 698 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CSNK1A1LQ8N752 337 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 ZNF676Q8N7Q3 588 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 TBC1D17Q9HA65 648 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 A0A096LPI6 279 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 RBMXL2O75526 392 aaKnown RBP16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CLEC3AO75596 197 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 WNT7BP56706 349 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CD47Q08722 323 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 CRTC1Q6UUV9 634 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 NXPE4Q6UWF7 544 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 RANBP10Q6VN20 620 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 LDAHQ9H6V9 325 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 POLE3Q9NRF9 147 aa16.66■□□□□ 0.26
PHRF1-202ENST00000413872 TNFRSF10BO14763 440 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CD9P21926 228 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 SLC6A6P31641 620 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 RHDQ02161 417 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 MVKQ03426 396 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 C1orf61Q13536 156 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 PON3Q15166 354 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 HSH2DQ96JZ2 352 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CSNK1G1Q9HCP0 422 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TM9SF3Q9HD45 589 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 THEGLP0DJG4 465 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 GLDCP23378 1020 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 SLC14A2Q15849 920 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 LIN52Q52LA3 116 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 RNF130Q86XS8 419 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 PNLDC1Q8NA58 520 aaKnown RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 RAB2BQ8WUD1 216 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 THRSPQ92748 146 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 DEFB126Q9BYW3 111 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TNFRSF10DQ9UBN6 386 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ZNF222Q9UK12 451 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 RARRES3Q9UL19 164 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 MYH6P13533 1939 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 GOLGA4Q13439 2230 aaKnown RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 HYKKA2RU49 373 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ZNF99A8MXY4 864 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 EMC8O43402 210 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TRAPPC6AO75865 159 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 OR2B3O76000 313 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 H6PDO95479 791 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 GBAP04062 536 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ALDOAP04075 364 aaKnown RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ITGB7P26010 798 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CDKL4Q5MAI5 379 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CATSPEREQ5SY80 951 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CST9Q5W186 159 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.65■□□□□ 0.261e-12■□□□□ 10.6
PHRF1-202ENST00000413872 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TMBIM1Q969X1 311 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TIMMDC1Q9NPL8 285 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TMEM184CQ9NVA4 438 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 PRDM4Q9UKN5 801 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 DRGXA6NNA5 263 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 LDB2O43679 373 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 AQP4P55087 323 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 HTRA3P83110 453 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 MEF2AQ02078 507 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 DMPKQ09013 629 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 HNRNPA1L2Q32P51 320 aaKnown RBP16.65■□□□□ 0.26
PHRF1-202ENST00000413872 CCDC80Q76M96 950 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ZBTB46Q86UZ6 589 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 FAR1Q8WVX9 515 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 ZUFSPQ96AP4 578 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 TGM7Q96PF1 710 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 RBP7Q96R05 134 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 UPB1Q9UBR1 384 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 GJD2Q9UKL4 321 aa16.65■□□□□ 0.26
PHRF1-202ENST00000413872 MGAT4BQ9UQ53 548 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms