RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 WDPCPO95876 746 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 SERPINA6P08185 405 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 SMIM10L1P0DMW3 83 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ICAM2P13598 275 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 CD22P20273 847 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 MAOAP21397 527 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 TYK2P29597 1187 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 HNRNPH1P31943 449 aaKnown RBP9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 GGT5P36269 586 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 IRF8Q02556 426 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF33BQ06732 778 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 CHIT1Q13231 466 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 NAB1Q13506 487 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF169Q14929 603 aaPredicted RBP9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 PDK4Q16654 411 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 CRB2Q5IJ48 1285 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 VN1R5Q7Z5H4 357 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 CA13Q8N1Q1 262 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 TEX9Q8N6V9 391 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 PLPP5Q8NEB5 264 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 KIF18AQ8NI77 898 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 PPP4R1Q8TF05 950 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 TRIM44Q96DX7 344 aaPredicted RBP9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 SMIM10Q96HG1 83 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAR2Q96K12 515 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 F2RL3Q96RI0 385 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ATOH8Q96SQ7 321 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 KCNK13Q9HB14 408 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 NECTIN3Q9NQS3 549 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 SNX15Q9NRS6 342 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF358Q9NW07 568 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 ANKRD10Q9NXR5 420 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 GPRC5BQ9NZH0 403 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 TLN1Q9Y490 2541 aaKnown RBP9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 CCDC88CQ9P219 2028 aa9.58□□□□□ -0.88
NCKIPSD-202ENST00000413374 A0A087X1B8 175 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 LRIT2A6NDA9 550 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 SAP18O00422 153 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 MAN1A2O60476 641 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PRMT3O60678 531 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PCNAP12004 261 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 GFAPP14136 432 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 EPORP19235 508 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 SOX11P35716 441 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 STXBP1P61764 594 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 TLR1Q15399 786 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 HIST2H2ACQ16777 129 aaPredicted RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PFKFB4Q16877 469 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM83EQ2M2I3 478 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 FHL5Q5TD97 284 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 ABHD17BQ5VST6 288 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 HIST2H2AA3Q6FI13 130 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PAPD4Q6PIY7 484 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 MYLK4Q86YV6 388 aaPredicted RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 CENPLQ8N0S6 344 aaPredicted RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PLD6Q8N2A8 252 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 RNF175Q8N4F7 328 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM26EQ8N5C1 309 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM47BQ8NA70 645 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PDPRQ8NCN5 879 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 GRHL3Q8TE85 626 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 SREK1Q8WXA9 508 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 MS4A6EQ96DS6 147 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 PTCD3Q96EY7 689 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR1F2PQ96R84 312 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 FMO2Q99518 471 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 NT5DC2Q9H857 520 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 NUDT4Q9NZJ9 180 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 OPTCQ9UBM4 332 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 NFU1Q9UMS0 254 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 ANGPTL3Q9Y5C1 460 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 SPTA1P02549 2419 aa9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 HELZ2Q9BYK8 2649 aaKnown RBP9.57□□□□□ -0.88
NCKIPSD-202ENST00000413374 A0A1W2PQ72 361 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 BLACEA4D250 179 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CYSRT1A8MQ03 144 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 MAGEB17A8MXT2 336 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 K7EPI3 171 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RTCAO00442 366 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 PCDH17O14917 1159 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 KERAO60938 352 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 SEMA7AO75326 666 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLEC3AO75596 197 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 AGFG2O95081 481 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 KLHL2O95198 593 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CBX6O95503 412 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 TBX6O95947 436 aaPredicted RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 TGFB1P01137 390 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 ALDOAP04075 364 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 INHBAP08476 426 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RHOXF2BP0C7M4 288 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RNH1P13489 461 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 MTHFD2P13995 350 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 IL10P22301 178 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 JAK1P23458 1154 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 ECHS1P30084 290 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 MSH2P43246 934 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 SERPINB8P50452 374 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 HNRNPFP52597 415 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms