RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 CXCR4P61073 352 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 HTRA3P83110 453 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 IFITM3Q01628 133 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 TEAD4Q15561 434 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 TIGD6Q17RP2 521 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 SLC5A12Q1EHB4 618 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ZNF805Q5CZA5 627 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 TNFAIP8L2Q6P589 184 aaPredicted RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 CHTF18Q8WVB6 975 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 TAS2R16Q9NYV7 291 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 RHOP08100 348 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 RXRGP48443 463 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 CDK6Q00534 326 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 PARS2Q7L3T8 475 aaKnown RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 YIPF6Q96EC8 236 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 CHCHD6Q9BRQ6 235 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ITPAQ9BY32 194 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 RNF167Q9H6Y7 350 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ATAD3AQ9NVI7 634 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 GPATCH2Q9NW75 528 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 C5AR2Q9P296 337 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 BTNL2Q9UIR0 455 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 EXO1Q9UQ84 846 aaKnown RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 HSPE1-MOB4S4R3N1 261 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 C1orf226A1L170 272 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 FAM227AF5H4B4 570 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 QSOX1O00391 747 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 PCDH17O14917 1159 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 GCM2O75603 506 aaPredicted RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 SERPIND1P05546 499 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
NUB1-201ENST00000413040 GADD45AP24522 165 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ERVFC1P60507 584 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ELP6Q0PNE2 266 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 NIPAL1Q6NVV3 410 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 NEK10Q6ZWH5 1172 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 CLIP4Q8N3C7 705 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 APH1BQ8WW43 257 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 HTRA1Q92743 480 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 ZBP1Q9H171 429 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 CORO2BQ9UQ03 480 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 PCDHGB1Q9Y5G3 927 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 PMF1-BGLAPU3KQ54 211 aa13.26□□□□□ -0.29
NUB1-201ENST00000413040 A0A0G2JN53 185 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 ABHD14A-ACY1A0A1B0GW23 586 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PIPSLA2A3N6 862 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 C1orf105O95561 183 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 NPPBP16860 134 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 SLC19A1P41440 591 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PRLHRP49683 370 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 C11orf96Q7Z7L8 435 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 CCDC103Q8IW40 242 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 OR56A3Q8NH54 315 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
NUB1-201ENST00000413040 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 BRF2Q9HAW0 419 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PLXNB3Q9ULL4 1909 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 ANKDD1BA6NHY2 528 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 ZSCAN9O15535 394 aaPredicted RBP13.25□□□□□ -0.29
NUB1-201ENST00000413040 TBX1O43435 398 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 KDM1AO60341 852 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 MMP20O60882 483 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 IL3P08700 152 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 CCL5P13501 91 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 ITGB8P26012 769 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PCGF2P35227 344 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 CD97P48960 835 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 TP53BP2Q13625 1128 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 MED22Q15528 200 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 FAHD1Q6P587 224 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 TRIM40Q6P9F5 258 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 DYNC2LI1Q8TCX1 351 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 FBLIM1Q8WUP2 373 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 REPS1Q96D71 796 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 AKIP1Q9NQ31 210 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 PAIP2BQ9ULR5 123 aaKnown RBP13.25□□□□□ -0.29
NUB1-201ENST00000413040 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 TMEM98Q9Y2Y6 226 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 MYO10Q9HD67 2058 aa13.25□□□□□ -0.29
NUB1-201ENST00000413040 POP7O75817 140 aaKnown RBP13.24□□□□□ -0.29
NUB1-201ENST00000413040 C1GALT1C1LP0DN25 315 aa13.24□□□□□ -0.29
NUB1-201ENST00000413040 HSD3B1P14060 373 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms