RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 TRIM54Q9BYV2 358 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TUBB1Q9H4B7 451 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 WDR26Q9H7D7 661 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZBTB20Q9HC78 741 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SEMA4BQ9NPR2 832 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PFDN4Q9NQP4 134 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 UTP6Q9NYH9 597 aaKnown RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TAS2R1Q9NYW7 299 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RPH3AQ9Y2J0 694 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ASB1Q9Y576 335 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZGRF1Q86YA3 2104 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 OR2AG2A6NM03 316 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 OR7A17O14581 309 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 STK16O75716 305 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 EML2O95834 649 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 OTCP00480 354 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ENO1P06733 434 aaKnown RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ANKRD34CP0C6C1 535 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FGF5P12034 268 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NCF2P19878 526 aaPredicted RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CYP2A7P20853 494 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SLC6A12P48065 614 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FOXA1P55317 472 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KCNK10P57789 538 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KCNJ2P63252 427 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HHEXQ03014 270 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PCDH1Q08174 1060 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 Q0VFX4 171 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TRAF3Q13114 568 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RPA4Q13156 261 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GTF2H3Q13889 308 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 BOP1Q14137 746 aaKnown RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 XKR7Q5GH72 579 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 DCAF10Q5QP82 559 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CLEC6AQ6EIG7 209 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 OGFOD2Q6N063 350 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 Q6ZS92 163 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MED25Q71SY5 747 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 LRRC70Q7Z2Q7 622 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GOLGA7Q7Z5G4 137 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 C11orf96Q7Z7L8 435 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZNF547Q8IVP9 402 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TEX9Q8N6V9 391 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TMEM102Q8N9M5 508 aaPredicted RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 OR2L2Q8NH16 312 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HM13Q8TCT9 377 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MCOLN3Q8TDD5 553 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FAR1Q8WVX9 515 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FBXL8Q96CD0 374 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MMADHCQ9H3L0 296 aaPredicted RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SLC40A1Q9NP59 571 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SUCOQ9UBS9 1254 aaKnown RBP9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CSAG2Q9Y5P2 127 aa9.1□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FER1L5A0AVI2 2057 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MGAT4DA6NG13 374 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 H0YHG0 523 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CCL21O00585 134 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PIP5K1BO14986 540 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GSC2O15499 205 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MGRN1O60291 552 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SKAP2O75563 359 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 JRKO75564 520 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 WDR47O94967 919 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GUCA1CO95843 209 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KRT16P08779 473 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HIST1H2AGP0C0S8 130 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MYCLP1P12525 358 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 COX4I1P13073 169 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZNF8P17098 575 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HIST1H2ADP20671 130 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PIK3R1P27986 724 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PRDX3P30048 256 aaKnown RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CPOXP36551 454 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HSPA7P48741 367 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 IST1P53990 364 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CDK3Q00526 305 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RIPK1Q13546 671 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ATP1A4Q13733 1029 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SQLEQ14534 574 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 C18orf21Q32NC0 220 aaPredicted RBP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GGTA1PQ4G0N0 100 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 DNAL1Q4LDG9 190 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SYTL3Q4VX76 610 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TMEM198Q66K66 360 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PWWP2BQ6NUJ5 590 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 LETMD1Q6P1Q0 360 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 IGFL3Q6UXB1 125 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RINLQ6ZS11 566 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PPP1R3BQ86XI6 285 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PLXDC1Q8IUK5 500 aa9.09□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SFRP1Q8N474 314 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms