RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 LHCGRP22888 699 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ITPKAP23677 461 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 FSHRP23945 695 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CRHBPP24387 322 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 IVDP26440 423 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CRATP43155 626 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 RGS6P49758 472 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 RAB5CP51148 216 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GPLD1P80108 840 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GALK2Q01415 458 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 KCNJ11Q14654 390 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TXNRD3NBQ6F5E7 133 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 RTL4Q6ZR62 310 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF675Q8TD23 568 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SMOC2Q9H3U7 446 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 REEP4Q9H6H4 257 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TLR9Q9NR96 1032 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CD84Q9UIB8 345 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 MYH6P13533 1939 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ERAL1O75616 437 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 STK16O75716 305 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CNTN5O94779 1100 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 IPO13O94829 963 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GABARAPO95166 117 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GOT2P00505 430 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 RLN1P04808 185 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ACSL1P33121 698 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GRIA1P42261 906 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CHRNA4P43681 627 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 HCAR3P49019 387 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 MEOX2P50222 304 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GATMP50440 423 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 AFF1P51825 1210 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SEC13P55735 322 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TEKQ02763 1124 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 NHSL2Q5HYW2 709 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZCCHC12Q6PEW1 402 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF574Q6ZN55 896 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SERPINA9Q86WD7 417 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF280BQ86YH2 543 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CMTR2Q8IYT2 770 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SVBPQ8N300 66 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 KDM1BQ8NB78 822 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CNIH3Q8TBE1 160 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SMAD5Q99717 465 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 POLR2J2Q9GZM3 115 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 DNTTIP1Q9H147 329 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CRTAC1Q9NQ79 661 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 INTS6Q9UL03 887 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 A3GALT2U3KPV4 340 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 MN1Q10571 1320 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CDRT1O95170 752 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 HTR3BO95264 441 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TCF3P15923 654 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 EPORP19235 508 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CPN2P22792 545 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 PPP3R1P63098 170 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 VITQ6UXI7 678 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 FAM83FQ8NEG4 500 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 UFD1Q92890 307 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 IGSF21Q96ID5 467 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 MYRFLQ96LU7 910 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF599Q96NL3 588 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 IFT27Q9BW83 186 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GULP1Q9UBP9 304 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 EIF2B4Q9UI10 523 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 INSL5Q9Y5Q6 135 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 IRAK3Q9Y616 596 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TRAV6A0A075B6T7 132 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 A0A0X1KG70 313 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 OR2AT4A6NND4 320 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SLC31A1O15431 190 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 OR10H2O60403 315 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 VIPP01282 170 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 PCCBP05166 539 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 FABP3P05413 133 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 MAGEA11P43364 429 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 FNTBP49356 437 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ILF3Q12906 894 aaKnown RBP eCLIP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNHIT3Q15649 155 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 TIGD3Q6B0B8 471 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 CDHR3Q6ZTQ4 885 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF367Q7RTV3 350 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ZC3H3Q8IXZ2 948 aaKnown RBP8.23□□□□□ -1.09
PBRM1-209ENST00000412587 OR1M1Q8NGA1 313 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 ACTR6Q9GZN1 396 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 SMURF2Q9HAU4 748 aa8.23□□□□□ -1.09
PBRM1-209ENST00000412587 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.22□□□□□ -1.09
PBRM1-209ENST00000412587 IGKV6D-21A0A0A0MT36 114 aa8.22□□□□□ -1.09
PBRM1-209ENST00000412587 IGKV6-21A0A0C4DH24 114 aa8.22□□□□□ -1.09
PBRM1-209ENST00000412587 FAM159BA6NKW6 160 aa8.22□□□□□ -1.09
PBRM1-209ENST00000412587 CLDN24A6NM45 220 aa8.22□□□□□ -1.09
PBRM1-209ENST00000412587 TOXO94900 526 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms