RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PSMG1O95456 288 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CLDN14O95500 239 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 C22orf31O95567 290 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TFAP2AP05549 437 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HOXB7P09629 217 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 DANCRP0C864 163 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SMIM18P0DKX4 95 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HNRNPCL4P0DMR1 293 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ERCC2P18074 760 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MUTP22033 750 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PTAFRP25105 342 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PTPN4P29074 926 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MC5RP33032 325 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CTNNA1P35221 906 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 GPC3P51654 580 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 FUT6P51993 359 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 RAP1GDS1P52306 607 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SLC18A1P54219 525 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SNRPEP62304 92 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TNNC1P63316 161 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 XIAPP98170 497 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CDK3Q00526 305 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 KLRC3Q07444 240 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 RALGDSQ12967 914 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MSLNQ13421 630 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CYLC2Q14093 348 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SCARB2Q14108 478 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PTPRCAPQ14761 206 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 NONOQ15233 471 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TGFBIQ15582 683 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HYAL4Q2M3T9 481 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MCMDC2Q4G0Z9 681 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HSP90AA4PQ58FG1 418 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ACSBG2Q5FVE4 666 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM91A1Q658Y4 838 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 DUPD1Q68J44 220 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM211Q6ICI0 200 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SPINK14Q6IE38 97 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SNRNP48Q6IEG0 339 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TEX38Q6PEX7 206 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM198BQ6UWH4 519 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF704Q6ZNC4 412 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC74BQ6ZQY2 392 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 Q75L30 129 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ERN2Q76MJ5 926 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MCM10Q7L590 875 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 GALNTL5Q7Z4T8 443 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 NANOGNBQ7Z5D8 188 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SLC9B2Q86UD5 537 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM173Q86WV6 379 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MAP7D3Q8IWC1 876 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 THNSL1Q8IYQ7 743 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 RNF113BQ8IZP6 322 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 RIBC1Q8N443 379 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 FBXO39Q8N4B4 442 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TTC30BQ8N4P2 665 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CPSF7Q8N684 471 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 METTL27Q8N6F8 245 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ALLCQ8N6M5 410 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PI4KAP1Q8N8J0 262 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 Q8NFD4 153 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 EXD1Q8NHP7 514 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SPATA22Q8NHS9 363 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HMGCLL1Q8TB92 370 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 WDR20Q8TBZ3 569 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPP4R1Q8TF05 950 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 DYDC1Q8WWB3 177 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 NELFBQ8WX92 580 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ATL1Q8WXF7 558 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SYN2Q92777 582 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TANKQ92844 425 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ABTB1Q969K4 478 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PIGTQ969N2 578 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 HAUS1Q96CS2 278 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ERLEC1Q96DZ1 483 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SGF29Q96ES7 293 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF414Q96IQ9 312 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MS4A14Q96JA4 679 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 LINC00615Q96LM1 132 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 C3orf30Q96M34 536 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 FER1L6-AS2Q96M78 137 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 BIRC8Q96P09 236 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 MS4A10Q96PG2 267 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 OR6C1Q96RD1 312 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CSF3RQ99062 836 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT12Q99456 494 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF184Q99676 751 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRMT1Q99873 361 aaKnown RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 CTRCQ99895 268 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SH3GL1Q99961 368 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 SIKE1Q9BRV8 207 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 UBAC1Q9BSL1 405 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 NUP85Q9BW27 656 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 OSBPL10Q9BXB5 764 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 TBC1D10AQ9BXI6 508 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ROPN1BQ9BZX4 212 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ST6GALNAC4Q9H4F1 302 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 OPA3Q9H6K4 179 aa2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 ROPN1Q9HAT0 212 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P2-201ENST00000411913 EQTNQ9NQ60 294 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms