RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TMEM26Q6ZUK4 368 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 CCDC80Q76M96 950 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 BMP8AQ7Z5Y6 402 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 PTOV1Q86YD1 416 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 ARL10Q8N8L6 244 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 SETD9Q8NE22 299 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 LZICQ8WZA0 190 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
LIMS1-205ENST00000410093 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF347Q96SE7 839 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 MENTQ9BUN1 341 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 SLC17A9Q9BYT1 436 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 ING2Q9H160 280 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 TAS2R9Q9NYW1 312 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 SLC23A2Q9UGH3 650 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 RAPGEFL1Q9UHV5 662 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 FAF1Q9UNN5 650 aaPredicted RBP13□□□□□ -0.33
LIMS1-205ENST00000410093 PADI2Q9Y2J8 665 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
LIMS1-205ENST00000410093 A0A1W2PP55 124 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 K7EQS6 105 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 SUV39H1O43463 412 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 DNAJB5O75953 348 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 FKBP9O95302 570 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF682O95780 498 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 MT-ND1P03886 318 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 GNAO1P09471 354 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 FPR1P21462 350 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 NDUFS1P28331 727 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 RYKP34925 604 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 RAB28P51157 221 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 TDGQ13569 410 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 NKG7Q16617 165 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 ZBED5Q49AG3 693 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 NAIF1Q69YI7 327 aaPredicted RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 PARM1Q6UWI2 310 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 HORMAD1Q86X24 394 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 CLECL1Q8IZS7 167 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 METTL25Q8N6Q8 603 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 FAM86B1Q8N7N1 296 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 OR2L8Q8NGY9 312 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 RGMAQ96B86 450 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 FAM122AQ96E09 287 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 MS4A8Q9BY19 250 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 CARS2Q9HA77 564 aaKnown RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 NEUROD4Q9HD90 331 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 MIEF1Q9NQG6 463 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 FAM118AQ9NWS6 357 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 ZSCAN32Q9NX65 697 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 THUMPD1Q9NXG2 353 aaKnown RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 SPASTQ9UBP0 616 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 NCKAP1Q9Y2A7 1128 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 BTBD3Q9Y2F9 522 aa12.99□□□□□ -0.33
LIMS1-205ENST00000410093 TDRKHQ9Y2W6 561 aaKnown RBP12.99□□□□□ -0.33
LIMS1-205ENST00000410093 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 A8MVJ9 347 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PLOD2O00469 737 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TOR1BO14657 336 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 VILLO15195 856 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 GUCY1B2O75343 617 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 KLK1P06870 262 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 ITGA2P17301 1181 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 DDCP20711 480 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 DRD1P21728 446 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 UQCRC2P22695 453 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 GRK3P35626 688 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 CDK9P50750 372 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 CLCNKAP51800 687 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 ITGA1P56199 1179 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TAS2R50P59544 299 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PRDX1Q06830 199 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 LSAMPQ13449 338 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 KEAP1Q14145 624 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 MLC1Q15049 377 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 GCNT6Q5T4J0 391 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SPESP1Q6UW49 350 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 NUDT13Q86X67 352 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 OR5P2Q8WZ92 322 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 FGF14Q92915 247 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 MAGED4Q96JG8 741 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 EPYCQ99645 322 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SLC35A5Q9BS91 424 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 DOHHQ9BU89 302 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 LGR4Q9BXB1 951 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 C8orf33Q9H7E9 229 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 REEP1Q9H902 201 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 RSL24D1Q9UHA3 163 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TAC3Q9UHF0 121 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 FBXL21Q9UKT6 434 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms