RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NPTX1Q15818 432 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 PTGISQ16647 500 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 ITPRIPL2Q3MIP1 535 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 NADK2Q4G0N4 442 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CFAP157Q5JU67 520 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 PRAMEF7Q5VXH5 474 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CES3Q6UWW8 571 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 C9orf139Q6ZV77 190 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 RUFY3Q7L099 469 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 ZNF554Q86TJ5 538 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CTAGE6Q86UF2 777 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 NFE4Q86UQ8 179 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 NUDT13Q86X67 352 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 APCDD1Q8J025 514 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 RYBPQ8N488 228 aaPredicted RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 MAB21L3Q8N8X9 362 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 OR2T34Q8NGX1 318 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 P2RX5Q93086 422 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 ESAMQ96AP7 390 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 C16orf58Q96GQ5 468 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 ST6GAL2Q96JF0 529 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 FAM20AQ96MK3 541 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 C17orf62Q9BQA9 187 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 PIGQQ9BRB3 760 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 GPR173Q9NS66 373 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 PIGVQ9NUD9 493 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 SMPD3Q9NY59 655 aaPredicted RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 NSD2O96028 1365 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 A0A0B4J203 849 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 CASTOR2A6NHX0 329 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 H0YC42 278 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 SLC28A1O00337 649 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 MAGEB3O15480 346 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 GPRIN2O60269 458 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ATP6V1G1O75348 118 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ZNF821O75541 412 aaPredicted RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 ATP6AP2O75787 350 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 MOCS2O96007 188 aaPredicted RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 GSRP00390 522 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 NR3C1P04150 777 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 CALCBP10092 127 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 EPB41P11171 864 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 FGF5P12034 268 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 CYP2F1P24903 491 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ELAVL4P26378 380 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 TMOD1P28289 359 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 HSPA1LP34931 641 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 PTGER3P43115 390 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ATP5OP48047 213 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 NR2C2P49116 596 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 CDH11P55287 796 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 SLC34A1Q06495 639 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 LGALS3BPQ08380 585 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 SNTB2Q13425 540 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 ACKR1Q16570 336 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 IMMTQ16891 758 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 DCAF10Q5QP82 559 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 FAM46CQ5VWP2 391 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 WBP2NLQ6ICG8 309 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 AMIGO1Q86WK6 493 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 MMD2Q8IY49 270 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 METTL27Q8N6F8 245 aaPredicted RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 LEMD2Q8NC56 503 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 DMBX1Q8NFW5 382 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 PIGBQ92521 554 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 PROX1Q92786 737 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 GPA33Q99795 319 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 PSD2Q9BQI7 771 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ZSCAN5AQ9BUG6 496 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 IDI2Q9BXS1 227 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 MTMR12Q9C0I1 747 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 TMEM117Q9H0C3 514 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 LRRC40Q9H9A6 602 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 UPF2Q9HAU5 1272 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 FARSBQ9NSD9 589 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 RAI14Q9P0K7 980 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 TAAR2Q9P1P5 351 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 ZDHHC2Q9UIJ5 367 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
LSM5-206ENST00000409987 MFHAS1Q9Y4C4 1052 aa4.68□□□□□ -1.66
LSM5-206ENST00000409987 CHD1O14646 1710 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 TMEM129A0AVI4 362 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 FAM25EA8MYX2 175 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 CHADO15335 359 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 KCNAB3O43448 404 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 BUB3O43684 328 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 RHOBTB1O94844 696 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OR6A2O95222 327 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 GZMAP12544 262 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 IRF2P14316 349 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 CPA3P15088 417 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 AMD1P17707 334 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 CA4P22748 312 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 PTPN4P29074 926 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OTX2P32243 289 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OR3A1P47881 315 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 SH3BGRP55822 239 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms