RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 SULT1C3Q6IMI6 304 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 SCIMPQ6UWF3 145 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 SLC22A18ASQ8N1D0 253 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 OR56A4Q8NGH8 313 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 RORBQ92753 470 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 DSN1Q9H410 356 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 ERVK-18Q9QC07 812 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 UTS2RQ9UKP6 389 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 SLC17A4Q9Y2C5 497 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 TIMM22Q9Y584 194 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 CEP192Q8TEP8 1941 aa13.75□□□□□ -0.21
MINDY4-202ENST00000409881 QSOX1O00391 747 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 TBX1O43435 398 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 FTH1P02794 183 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 RAP2AP10114 183 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PRKACGP22612 351 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 CD38P28907 300 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PPP5CP53041 499 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 MTPNP58546 118 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ARPC4P59998 168 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 BOP1Q14137 746 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 BCL7AQ4VC05 210 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 LINC00299Q6ZSB3 139 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 RD3Q7Z3Z2 195 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 P2RY8Q86VZ1 359 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 GALNT13Q8IUC8 556 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF547Q8IVP9 402 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 RHOXF1Q8NHV9 184 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 MCOLN3Q8TDD5 553 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PDXPQ96GD0 296 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF514Q96K75 400 aaPredicted RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PPM1MQ96MI6 270 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 MARCH7Q9H992 704 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 NECTIN3Q9NQS3 549 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 UPK1BO75841 260 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 WNT1P04628 370 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 GSNP06396 782 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 FGF4P08620 206 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 CNR2P34972 360 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 GNPDA1P46926 289 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 CLCN7P51798 805 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ISL1P61371 349 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PLIN5Q00G26 463 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 CHRNB3Q05901 458 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 FAM98BQ52LJ0 330 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 SPESP1Q6UW49 350 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 FBXO30Q8TB52 745 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PHF10Q8WUB8 498 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 ELMO1Q92556 727 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 TSACCQ96A04 125 aaPredicted RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 SP140LQ9H930 580 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 LEF1Q9UJU2 399 aaPredicted RBP13.74□□□□□ -0.21
MINDY4-202ENST00000409881 NAALAD2Q9Y3Q0 740 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 TESMINQ9Y4I5 508 aa13.74□□□□□ -0.21
MINDY4-202ENST00000409881 PIKFYVEQ9Y2I7 2098 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 LOC100130705A0A1B0GUX0 176 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 PRSS38A1L453 326 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 NOTOA8MTQ0 251 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 HS6ST1O60243 411 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 LILRB5O75023 590 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 HPRP00739 348 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 PSMB9P28065 219 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 CCR7P32248 378 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 EMX2Q04743 252 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 TOP3AQ13472 1001 aaPredicted RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 UBE2UQ5VVX9 321 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 PAQR3Q6TCH7 311 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 ENPP6Q6UWR7 440 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 ZBTB2Q8N680 514 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 C1orf216Q8TAB5 229 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 OR1E3Q8WZA6 343 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 CCM2Q9BSQ5 444 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 OSBPL10Q9BXB5 764 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 GPR34Q9UPC5 381 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 GPSM3Q9Y4H4 160 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 PCDHGA2Q9Y5H1 932 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 A0A1W2PR77 199 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 GPR89AB7ZAQ6 455 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 RGS13O14921 159 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 DYRK3O43781 588 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 CRCPO75575 148 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms