RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AQP9O43315 295 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PIAS2O75928 621 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 LRATO95237 230 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PIM1P11309 404 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 HOXB3P14651 431 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TSFMP43897 325 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FNTBP49356 437 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TRA2BP62995 288 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 LRRC74AQ0VAA2 488 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FLOT2Q14254 428 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PLCL1Q15111 1095 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 HKDC1Q2TB90 917 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RABL3Q5HYI8 236 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 IRAK1BP1Q5VVH5 260 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PEAR1Q5VY43 1037 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OR4F3Q6IEY1 312 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TSSK4Q6SA08 328 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SPESP1Q6UW49 350 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RNF148Q8N7C7 305 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FAM46DQ8NEK8 389 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 DNAJB14Q8TBM8 379 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NELL1Q92832 810 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 STMN2Q93045 179 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ZUFSPQ96AP4 578 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RGMAQ96B86 450 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TM4SF19Q96DZ7 209 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CCDC115Q96NT0 180 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PHF12Q96QT6 1004 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 F2RL3Q96RI0 385 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CPPED1Q9BRF8 314 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BHLHE41Q9C0J9 482 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 MIR1-1HGQ9H1L0 117 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 S100A14Q9HCY8 104 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 EVA1BQ9NVM1 165 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BCAP29Q9UHQ4 241 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BTBD3Q9Y2F9 522 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 AP3M1Q9Y2T2 418 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 COL6A3P12111 3177 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GNG14A0A1W2PPG7 69 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 TCRBV3S1A0A5B6 114 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 OR5K3A6NET4 321 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 C4orf51C9J302 202 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 H3BNX3 289 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 SAP18O00422 153 aaKnown RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 RNASET2O00584 256 aaKnown RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 DFNA5O60443 496 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 SH3BGRLO75368 114 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 SCELO95171 688 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 KLK1P06870 262 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 COX7A2P14406 83 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 HTR1EP28566 365 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CTSKP43235 329 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GSK3BP49841 420 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CYP4F2P78329 520 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 SELPLGQ14242 412 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 RCN1Q15293 331 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 DUOXA1Q1HG43 343 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 LCN8Q6JVE9 175 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 RNF44Q7L0R7 432 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 PAGE2Q7Z2X7 111 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 VN1R4Q7Z5H5 301 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 ADCK2Q7Z695 626 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 NUDT13Q86X67 352 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 PLD3Q8IV08 490 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 FAM156AQ8NDB6 213 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GOT1L1Q8NHS2 421 aaPredicted RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 LMX1AQ8TE12 382 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GAB3Q8WWW8 586 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 MS4A6EQ96DS6 147 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 PPM1MQ96MI6 270 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 QRFPRQ96P65 431 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 DUSP26Q9BV47 211 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 TRIM4Q9C037 500 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 ALG2Q9H553 416 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 SLC6A13Q9NSD5 602 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 C6orf203Q9P0P8 240 aaPredicted RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GMPR2Q9P2T1 348 aaKnown RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 POMT2Q9UKY4 750 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CSNK1G3Q9Y6M4 447 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 A0A0J9YY10 115 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 TRIM64CA6NLI5 447 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 B4DGG1 531 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 AKAP10O43572 662 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 B3GALT4O96024 378 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 ZCCHC18P0CG32 403 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 LAMP1P11279 417 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 POLR2CP19387 275 aaPredicted RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CDKN2CP42773 168 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 LSSP48449 732 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CSNK1EP49674 416 aaKnown RBP5.26□□□□□ -1.57
EPHA4-202ENST00000409854 GZMMP51124 257 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 BNC1Q01954 994 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 LIPEQ05469 1076 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 CYP4F3Q08477 520 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 PGS1Q32NB8 556 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 ZNF385BQ569K4 471 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 OR4C11Q6IEV9 310 aa5.26□□□□□ -1.57
EPHA4-202ENST00000409854 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms