RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 GBAP04062 536 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TIMP2P16035 220 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CD9P21926 228 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 UQCRC2P22695 453 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RACK1P63244 317 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CCNIQ14094 377 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GANABQ14697 944 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PRPF38BQ5VTL8 546 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CARD17Q5XLA6 110 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 NAIF1Q69YI7 327 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 BICRALQ6AI39 1079 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ABRAXAS1Q6UWZ7 409 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RBM44Q6ZP01 1051 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TICAM1Q8IUC6 712 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM130Q8N3G9 435 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CHST4Q8NCG5 386 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 C3orf58Q8NDZ4 430 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TOR1AIP2Q8NFQ8 470 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OR6K6Q8NGW6 343 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 AP3S1Q92572 193 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PEX13Q92968 403 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CPNE2Q96FN4 548 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 FER1L6-AS2Q96M78 137 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 EDEM2Q9BV94 578 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DGCR6LQ9BY27 220 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OR51V1Q9H2C8 321 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PRSS16Q9NQE7 514 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 U3KQV3 271 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 A0A1B0GVT2 93 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SH3PXD2BA1X283 911 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CPSF4LA6NMK7 179 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TTLL8A6PVC2 850 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 EFCAB9A8MZ26 197 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 C9JVG2 144 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM63AO94886 807 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PSMG1O95456 288 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CLPTM1O96005 669 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PORP16435 677 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PRDX6P30041 224 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MNDAP41218 407 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RPS9P46781 194 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CSNK1DP48730 415 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RPS6KA3P51812 740 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SHC2P98077 582 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF763Q0D2J5 394 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DGCR6Q14129 220 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 KIR2DS3Q14952 304 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM44Q2T9K0 475 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 KRT74Q7RTS7 529 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PNLDC1Q8NA58 520 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OR10H4Q8NGA5 316 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OR56A3Q8NH54 315 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 NFKBIDQ8NI38 313 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PIWIL1Q96J94 861 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RBM4BQ9BQ04 359 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GORASP1Q9BQQ3 440 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RBM4Q9BWF3 364 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CXXC1Q9P0U4 656 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CPNE7Q9UBL6 633 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TBX21Q9UL17 535 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 IFT52Q9Y366 437 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PCDHGB1Q9Y5G3 927 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 AP1M2Q9Y6Q5 423 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CCDC88AQ3V6T2 1871 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 BAZ2BQ9UIF8 2168 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DDX60Q8IY21 1712 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SLC9B1P1A6NJY1 282 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 IDH3BO43837 385 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SCRG1O75711 98 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SIX3O95343 332 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TACSTD2P09758 323 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 EIF1AXP47813 144 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PITX1P78337 314 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SIM1P81133 766 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CHAF1BQ13112 559 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CYP1B1Q16678 543 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 LIN52Q52LA3 116 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 FBXO42Q6P3S6 717 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZC3HC1Q86WB0 502 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CNTD1Q8N815 330 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DDX1Q92499 740 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DHRS1Q96LJ7 313 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF570Q96NI8 536 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RNF38Q9H0F5 515 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZBTB20Q9HC78 741 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 THAP10Q9P2Z0 257 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 KCND3Q9UK17 655 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MAN2B2Q9Y2E5 1009 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DLGAP4Q9Y2H0 992 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MRPS7Q9Y2R9 242 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PCDHGA6Q9Y5G7 932 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 NSG1A0A0A6YYJ2 146 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 DRGXA6NNA5 263 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 FTCDNL1E5RQL4 147 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 EMC8O43402 210 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 PEX14O75381 377 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms