RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TXNDC16Q9P2K2 825 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-207ENST00000403994 IGKV3D-11A0A0A0MRZ8 115 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 URADA6NGE7 173 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 MAN1A2O60476 641 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 B4GALT2O60909 372 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 CCDC166P0CW27 439 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 SMIM10L1P0DMW3 83 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
TPM1-207ENST00000403994 GP5P40197 560 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 KCNK10P57789 538 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 GPX6P59796 221 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 PMP22Q01453 160 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 TUBA3CQ13748 450 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 OR4D1Q15615 310 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 ZKSCAN8Q15776 578 aaPredicted RBP14.43□□□□□ -0.1
TPM1-207ENST00000403994 TUBA3EQ6PEY2 450 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 MDS2Q8NDY4 140 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 SUN3Q8TAQ9 357 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 FBXO25Q8TCJ0 367 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 GAL3ST3Q96A11 431 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 SMIM10Q96HG1 83 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 ZNF354BQ96LW1 612 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 ABI3Q9P2A4 366 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 DCHS2Q6V1P9 2916 aa14.43□□□□□ -0.1
TPM1-207ENST00000403994 LRRTM2O43300 516 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 PRMT3O60678 531 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 RASAL1O95294 804 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 STSP08842 583 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 C1GALT1C1LP0DN25 315 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 CD1DP15813 335 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 STMN1P16949 149 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 MAOAP21397 527 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 HNRNPH1P31943 449 aaKnown RBP14.42□□□□□ -0.1
TPM1-207ENST00000403994 BTG2P78543 158 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ACTN3Q08043 901 aaPredicted RBP14.42□□□□□ -0.1
TPM1-207ENST00000403994 MEP1AQ16819 746 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 FBXO48Q5FWF7 155 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ZNF766Q5HY98 468 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ZDHHC24Q6UX98 284 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 TMIGD1Q6UXZ0 262 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 CYS1Q717R9 158 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ZNF572Q7Z3I7 529 aaPredicted RBP14.42□□□□□ -0.1
TPM1-207ENST00000403994 CCDC25Q86WR0 208 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 GPSM1Q86YR5 675 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 CA13Q8N1Q1 262 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 TCAIMQ8N3R3 496 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 KIF2BQ8N4N8 673 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 SLC5A8Q8N695 610 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 PDPRQ8NCN5 879 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 TTLQ8NG68 377 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 PTCHD1Q96NR3 888 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 SIGLEC12Q96PQ1 595 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 CLK4Q9HAZ1 481 aaKnown RBP14.42□□□□□ -0.1
TPM1-207ENST00000403994 DNAJC11Q9NVH1 559 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ANKRD10Q9NXR5 420 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 COPG2Q9UBF2 871 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 UTP11Q9Y3A2 253 aaKnown RBP14.42□□□□□ -0.1
TPM1-207ENST00000403994 APCP25054 2843 aa14.42□□□□□ -0.1
TPM1-207ENST00000403994 ADGRG4Q8IZF6 3080 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 TACC2O95359 2948 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 TCRBV16S1A1N1A0A5B0 115 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 SAGE2PA6NJ88 616 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 PSMD12O00232 456 aaPredicted RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 TAPBPO15533 448 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 ERI3O43414 337 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 CRYABP02511 175 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 GSTA2P09210 222 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 MST1P26927 711 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 COL8A1P27658 744 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 GSTM2P28161 218 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 CASQ1P31415 396 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 GGT5P36269 586 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 GMPRP36959 345 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 HSPA7P48741 367 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 ST13P50502 369 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 PLTPP55058 493 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 PER3P56645 1201 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 TAS2R50P59544 299 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 RAB10P61026 200 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 ATP6V0D1P61421 351 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 STXBP1P61764 594 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 ETF1P62495 437 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 CAV1Q03135 178 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 SLMAPQ14BN4 828 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.11e-5■■■□□ 16.7
TPM1-207ENST00000403994 OR1C1Q15619 314 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 KBTBD12Q3ZCT8 623 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 CDKL4Q5MAI5 379 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 C1QL3Q5VWW1 255 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 SYT10Q6XYQ8 523 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 C3orf62Q6ZUJ4 267 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 VN1R5Q7Z5H4 357 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 CTAGE3PQ8IX95 158 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 LGI4Q8N135 537 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 ELP5Q8TE02 316 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 CCT6BQ92526 530 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 EXT2Q93063 718 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 UBXN10Q96LJ8 280 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms