RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 AMER3Q8N944 861 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TRPV3Q8NET8 790 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 PPCDCQ96CD2 204 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TM4SF18Q96CE8 201 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 QRFPRQ96P65 431 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TEFMQ96QE5 360 aaKnown RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 AP3M1Q9Y2T2 418 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 C15orf41Q9Y2V0 281 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 RNASET2O00584 256 aaKnown RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 ZW10O43264 779 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TNFSF14O43557 240 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TMPRSS11DO60235 418 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 GZMMP51124 257 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 SLC14A1Q13336 389 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 OR4C11Q6IEV9 310 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 TSSK4Q6SA08 328 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 CALHM3Q86XJ0 350 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 ABCA7Q8IZY2 2146 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 LILRA2Q8N149 483 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 DTWD1Q8N5C7 304 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 ZNF548Q8NEK5 533 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 OR2T12Q8NG77 320 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 LMX1AQ8TE12 382 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 MS4A6EQ96DS6 147 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 DUSP15Q9H1R2 295 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 DDX31Q9H8H2 851 aaKnown RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 C6orf203Q9P0P8 240 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-205ENST00000401607 RIMS3Q9UJD0 308 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 PCDHGA2Q9Y5H1 932 aa24.44■■□□□ 1.5
CPNE1-205ENST00000401607 A0A0G2JN53 185 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 TCRBV5S2A0A599 114 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 ARHGAP10A1A4S6 786 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 SLC7A1P30825 629 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 PLA2G16P53816 162 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 KLC1Q07866 573 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 FCRL6Q6DN72 434 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 ZNF793Q6ZN11 406 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 RBM12BQ8IXT5 1001 aaKnown RBP24.43■■□□□ 1.5
CPNE1-205ENST00000401607 VPS37AQ8NEZ2 397 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 FCRL4Q96PJ5 515 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 C17orf62Q9BQA9 187 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 ATAD3AQ9NVI7 634 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 EVA1BQ9NVM1 165 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 SPASTQ9UBP0 616 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 MAGEL2Q9UJ55 1249 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 AP4S1Q9Y587 144 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 ENTPD2Q9Y5L3 495 aa24.43■■□□□ 1.5
CPNE1-205ENST00000401607 A0A0A6YYD5 115 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 C2orf74A8MZ97 194 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 CASQ2O14958 399 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 RPS15AP62244 130 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 TJAP1Q5JTD0 557 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 WLSQ5T9L3 541 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 ZNF621Q6ZSS3 439 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 VN1R4Q7Z5H5 301 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 PROSER1Q86XN7 944 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 CANT1Q8WVQ1 401 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 CIDECQ96AQ7 238 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 PHF12Q96QT6 1004 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 RPF2Q9H7B2 306 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 COPS7BQ9H9Q2 264 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 WBP11Q9Y2W2 641 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 COL6A3P12111 3177 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 NVLO15381 856 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 GGT1P19440 569 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 LSSP48449 732 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 CSNK1EP49674 416 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 MAZP56270 477 aaKnown RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 SLC5A12Q1EHB4 618 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 AASDHQ4L235 1098 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 TOR1AIP1Q5JTV8 583 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 GLYATQ6IB77 296 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 FBXO42Q6P3S6 717 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 SPESP1Q6UW49 350 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 ZNF551Q7Z340 670 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-205ENST00000401607 GPR155Q7Z3F1 870 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 GKN2Q86XP6 184 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 TICAM1Q8IUC6 712 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 GOLM1Q8NBJ4 401 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 FAM110BQ8TC76 370 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 PKP2Q99959 881 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 TBCDQ9BTW9 1192 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 HRASLS2Q9NWW9 162 aa24.42■■□□□ 1.5
CPNE1-205ENST00000401607 FAM220BPB1ANY3 271 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 VILLO15195 856 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 DDCP20711 480 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 SSR2P43308 183 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 LRRC74AQ0VAA2 488 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 IRAK1BP1Q5VVH5 260 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 LPCAT4Q643R3 524 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 ABHD17CQ6PCB6 329 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 KBTBD2Q8IY47 623 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 SLC6A16Q9GZN6 736 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 MIEF1Q9NQG6 463 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 ANKMY1Q9P2S6 941 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 KLK4Q9Y5K2 254 aa24.41■■□□□ 1.5
CPNE1-205ENST00000401607 MDC1Q14676 2089 aaKnown RBP24.4■■□□□ 1.5
CPNE1-205ENST00000401607 DHRS12A0PJE2 317 aa24.4■■□□□ 1.5
CPNE1-205ENST00000401607 C1orf226A1L170 272 aa24.4■■□□□ 1.5
CPNE1-205ENST00000401607 CLIC1O00299 241 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms