RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 PCDH7O60245 1069 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 AOC2O75106 756 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PRKACBP22694 351 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 GGT2P36268 569 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PARP15Q460N3 678 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM124AQ86V42 546 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PTOV1Q86YD1 416 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 TIGD4Q8IY51 512 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 STK40Q8N2I9 435 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 MTERF3Q96E29 417 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 TRMT61AQ96FX7 289 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 SLC39A13Q96H72 371 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIB3Q96RU7 358 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PCDHGB3Q9Y5G1 929 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A0C4DFX4 3053 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PDHXO00330 501 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PCDH17O14917 1159 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 YY2O15391 372 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 F2P00734 622 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 EPOP01588 193 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TACR2P21452 398 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PTGER3P43115 390 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 MAGEA11P43364 429 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 OR1G1P47890 313 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 MRPL19P49406 292 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CLDN8P56748 225 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 VEPH1Q14D04 833 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 DPY19L3Q6ZPD9 716 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 DENND1CQ8IV53 801 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 BBS7Q8IWZ6 715 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 NAGSQ8N159 534 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 DEDD2Q8WXF8 326 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ASB15Q8WXK1 588 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIM63Q969Q1 353 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 STMN3Q9NZ72 180 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 COMMD3Q9UBI1 195 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CRLS1Q9UJA2 301 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SLC22A14Q9Y267 594 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 NINQ8N4C6 2090 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 FZD9O00144 591 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PLD2O14939 933 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CYP17A1P05093 508 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PTPN6P29350 595 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 DDOSTP39656 456 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SCN1BQ07699 218 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 HNRNPA0Q13151 305 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SSX1Q16384 188 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ALKBH2Q6NS38 261 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TMIGD1Q6UXZ0 262 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF683Q8IZ20 524 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TAGAPQ8N103 731 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 OR4K1Q8NGD4 311 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 EID2BQ96D98 161 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 FRMD6Q96NE9 622 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 UCKL1Q9NWZ5 548 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CCDC59Q9P031 241 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ACSL6Q9UKU0 697 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CFAP20Q9Y6A4 193 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIP12Q14669 1992 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 MBLAC1A4D2B0 266 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 HMX3A6NHT5 357 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 WASH4PA8MWX3 477 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 H3BN98 237 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CXCL11O14625 94 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF7P17097 686 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 HOXD9P28356 352 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 HTR7P34969 479 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CNR2P34972 360 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 OR3A3P47888 321 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF79Q15937 498 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SPDYE7PQ495Y7 208 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 CELF5Q8N6W0 485 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SMAD5Q99717 465 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 GKN1Q9NS71 199 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 NLKQ9UBE8 527 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 SNX7Q9UNH6 387 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 YARS2Q9Y2Z4 477 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 TSC2P49815 1807 aa9.5□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A1W2PQL4 384 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 ETFAP13804 333 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 ITGA2P17301 1181 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 CD72P21854 359 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 SLC6A4P31645 630 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 ITGA1P56199 1179 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 CDH18Q13634 790 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 BOP1Q14137 746 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PTGES3Q15185 160 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 QPRTQ15274 297 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 LRRC73Q5JTD7 316 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 C22orf42Q6IC83 251 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms