RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 DNAJB5O75953 348 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 OR4F21O95013 312 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 HBQ1P09105 142 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ARSFP54793 590 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 SNRPNP63162 240 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 TLE1Q04724 770 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 RGS1Q08116 209 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 DDX39BQ13838 428 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ZRSR2Q15696 482 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 UGT8Q16880 541 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 HHATQ5VTY9 493 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ZNF385CQ66K41 422 aaPredicted RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 RHBDD2Q6NTF9 364 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 NUDCD3Q8IVD9 361 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 LAS2Q8IYD9 372 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ARHGEF39Q8N4T4 335 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 METTL27Q8N6F8 245 aaPredicted RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 TRPV3Q8NET8 790 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 OR7G3Q8NG95 312 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 NT5CQ8TCD5 201 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ADAMTS17Q8TE56 1095 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 CREB3L4Q8TEY5 395 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 SREK1Q8WXA9 508 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 ZNF225Q9UK10 706 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 FARSAQ9Y285 508 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 TNRC6AQ8NDV7 1962 aaKnown RBP24.14■■□□□ 1.45
U2AF1-203ENST00000398137 A0A1B0GX78 115 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 UBFD1O14562 309 aaKnown RBP24.13■■□□□ 1.45
U2AF1-203ENST00000398137 PDGFAP04085 211 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 ALAS2P22557 587 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 GSTM2P28161 218 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 WDR4P57081 412 aaKnown RBP24.13■■□□□ 1.45
U2AF1-203ENST00000398137 NAA20P61599 178 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 PWP1Q13610 501 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 MUM1Q2TAK8 710 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 FAM214AQ32MH5 1076 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 GGTA1PQ4G0N0 100 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 COLEC12Q5KU26 742 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 YOD1Q5VVQ6 348 aaPredicted RBP24.13■■□□□ 1.45
U2AF1-203ENST00000398137 FAM198BQ6UWH4 519 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 APLFQ8IW19 511 aaPredicted RBP24.13■■□□□ 1.45
U2AF1-203ENST00000398137 AGAP11Q8TF27 550 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 SHCBP1LQ9BZQ2 653 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 RHBGQ9H310 441 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 CLMPQ9H6B4 373 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 TRPS1Q9UHF7 1281 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 PCDHGA11Q9Y5H2 935 aa24.13■■□□□ 1.45
U2AF1-203ENST00000398137 H0YIV9 168 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 DSCR3O14972 297 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 BIRC5O15392 142 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 SLC18A1P54219 525 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 EMP3P54852 163 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 PKNOX1P55347 436 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 KCNC4Q03721 635 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 LACTB2Q53H82 288 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-203ENST00000398137 TOR1AIP1Q5JTV8 583 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 CPZQ66K79 652 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 TTC19Q6DKK2 380 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-203ENST00000398137 TMEM214Q6NUQ4 689 aaKnown RBP24.12■■□□□ 1.45
U2AF1-203ENST00000398137 RNF175Q8N4F7 328 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 CDYL2Q8N8U2 506 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 PPP1R14CQ8TAE6 165 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 PROKR1Q8TCW9 393 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 REPS1Q96D71 796 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 SEC16BQ96JE7 1060 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 GBP5Q96PP8 586 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 SLC6A16Q9GZN6 736 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 MID1IP1Q9NPA3 183 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 MAN2B2Q9Y2E5 1009 aa24.12■■□□□ 1.45
U2AF1-203ENST00000398137 SETXQ7Z333 2677 aaKnown RBP24.12■■□□□ 1.45
U2AF1-203ENST00000398137 UBR5O95071 2799 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-203ENST00000398137 CCDC88CQ9P219 2028 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 CLEC3AO75596 197 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 SERPINA6P08185 405 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 RPS15P62841 145 aaKnown RBP24.11■■□□□ 1.45
U2AF1-203ENST00000398137 HYAL2Q12891 473 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 NDUFA9Q16795 377 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 GARNL3Q5VVW2 1013 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 ENDOVQ8N8Q3 282 aaKnown RBP24.11■■□□□ 1.45
U2AF1-203ENST00000398137 HUS1BQ8NHY5 278 aa24.11■■□□□ 1.45
U2AF1-203ENST00000398137 ZNF473Q8WTR7 871 aaKnown RBP24.11■■□□□ 1.45
U2AF1-203ENST00000398137 MAGEB10Q96LZ2 347 aaPredicted RBP24.11■■□□□ 1.45
U2AF1-203ENST00000398137 MTERF1Q99551 399 aaKnown RBP24.11■■□□□ 1.45
U2AF1-203ENST00000398137 DYNC1I1O14576 645 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 NPHS1O60500 1241 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 ESRRBO95718 433 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 KLK3P07288 261 aaPredicted RBP24.1■■□□□ 1.45
U2AF1-203ENST00000398137 RAB40ALP0C0E4 278 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 IL1RNP18510 177 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 ITGAXP20702 1163 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 SERPINB1P30740 379 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 HNRNPH1P31943 449 aaKnown RBP24.1■■□□□ 1.45
U2AF1-203ENST00000398137 CASRP41180 1078 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 NEK2P51955 445 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 RCN2Q14257 317 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 CHI3L2Q15782 390 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 TCTN3Q6NUS6 607 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 PRSS41Q7RTY9 318 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 CNDP1Q96KN2 507 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 KCNA7Q96RP8 456 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms