RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PMEPA1Q969W9 287 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 SH3KBP1Q96B97 665 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 TESCQ96BS2 214 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 METTL2AQ96IZ6 378 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 KCNC2Q96PR1 638 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 SLC22A4Q9H015 551 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 MMP28Q9H239 520 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 DYRK4Q9NR20 520 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 RPS6KA6Q9UK32 745 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 SCO1O75880 301 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 OR2B3O76000 313 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 INHAP05111 366 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ZNF30P17039 623 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ATF4P18848 351 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 AQP1P29972 269 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 TNFSF8P32971 234 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 HNF1BP35680 557 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ELP6Q0PNE2 266 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 CAMK2GQ13555 558 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 IRF3Q14653 427 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 NDUFAF5Q5TEU4 345 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 FUT10Q6P4F1 479 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 TMEM173Q86WV6 379 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 PTOV1Q86YD1 416 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 CLECL1Q8IZS7 167 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 COPS4Q9BT78 406 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 CFHR5Q9BXR6 569 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 OR51E2Q9H255 320 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 RNF167Q9H6Y7 350 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 RDH14Q9HBH5 336 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ZMAT5Q9UDW3 170 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 CFL2Q9Y281 166 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 A0A075B6Q4 140 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SLC9A3R1O14745 358 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SMAD6O43541 496 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 C1QBP02746 253 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SEMG1P04279 462 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 MYL9P24844 172 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 HLA-DMAP28067 261 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 LIMK1P53667 647 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 DUOXA1Q1HG43 343 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 BTBD16Q32M84 506 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 FBXO43Q4G163 708 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 MACC1Q6ZN28 852 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 ANKS3Q6ZW76 656 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 TSPAN33Q86UF1 283 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 P3H2Q8IVL5 708 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 RDH10Q8IZV5 341 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 YIPF7Q8N8F6 280 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 DBF4BQ8NFT6 615 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 WFDC5Q8TCV5 224 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 POP5Q969H6 163 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 PLD4Q96BZ4 506 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 TRAF4Q9BUZ4 470 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 TTLL2Q9BWV7 592 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 PRRG3Q9BZD7 231 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 C3orf14Q9HBI5 128 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 ASAH2Q9NR71 780 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 NUDT7P0C024 238 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 ACADMP11310 421 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 ITPKAP23677 461 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 CSKP41240 450 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SLC11A1P49279 550 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SRP54P61011 504 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SF1Q15637 639 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SOWAHCQ53LP3 525 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 NOXRED1Q6NXP6 359 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 UBE2R2Q712K3 238 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 SYT12Q8IV01 421 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 VWA5B2Q8N398 1253 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 DTX3Q8N9I9 347 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 CMTM7Q96FZ5 175 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 FRMD6Q96NE9 622 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 CWH43Q9H720 699 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 STOML2Q9UJZ1 356 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 PCDHB7Q9Y5E2 793 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 PCDHGA6Q9Y5G7 932 aa15.37■□□□□ 0.05
CHMP1A-201ENST00000397901 KCNE1BA0A087WTH5 132 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 LINC00862A6NCI5 91 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 C2orf78A6NCI8 922 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 MAGEB17A8MXT2 336 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 ATP6V1G2-DDX39BF2Z307 99 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 CSTF2P33240 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 TALDO1P37837 337 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 ITGA1P56199 1179 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 UGT8Q16880 541 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 EIF3MQ7L2H7 374 aaKnown RBP15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 NXPE1Q8N323 547 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 UBASH3BQ8TF42 649 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 TRBV5-4A0A0C4DH59 114 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 AKR7A2O43488 359 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 TRIM3O75382 744 aaPredicted RBP15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 TRBC1P01850 177 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 COX7A2P14406 83 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 AMD1P17707 334 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 CD72P21854 359 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 MAPK1P28482 360 aa15.36■□□□□ 0.05
CHMP1A-201ENST00000397901 NUDT6P53370 316 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms