RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CYP2R1Q6VVX0 501 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 C17orf64Q86WR6 236 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 FAM9CQ8IZT9 166 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 LIX1Q8N485 282 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 OR8J3Q8NGG0 315 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 SLC13A3Q8WWT9 602 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 ZBTB18Q99592 522 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CCDC3Q9BQI4 270 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 EFHD1Q9BUP0 239 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 SLAMF8Q9P0V8 285 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 SNX13Q9Y5W8 968 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 RP1P56715 2156 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 TCRBV5S2A0A599 114 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CLGNO14967 610 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 B4GAT1O43505 415 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CCNDBP1O95273 360 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 GPIP06744 558 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PRPS2P11908 318 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 BCKDHAP12694 445 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 UGT2B7P16662 529 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 NPPBP16860 134 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CSTF3Q12996 717 aaKnown RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 SF1Q15637 639 aaKnown RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 AMZ1Q400G9 498 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 ICA1LQ8NDH6 482 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 OR2A1Q8NGT9 310 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 BAHD1Q8TBE0 780 aaPredicted RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 DNAJB14Q8TBM8 379 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 NCSTNQ92542 709 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CGREF1Q99674 301 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CDC6Q99741 560 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 DPY30Q9C005 99 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 TWSG1Q9GZX9 223 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 ELOVL6Q9H5J4 265 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 GPRC5BQ9NZH0 403 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 RAB26Q9ULW5 256 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 ZFHX2Q9C0A1 2572 aaPredicted RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 TRBV5-3A0A0A0MS03 114 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 DENRO43583 198 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 CBFA2T3O75081 653 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 SEC22BO75396 215 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 IL6P05231 212 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 CD22P20273 847 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ACP1P24666 158 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 CMPK1P30085 196 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 GRIA3P42263 894 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 CASP2P42575 452 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 HSPA13P48723 471 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 CLDN8P56748 225 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ABATP80404 500 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 PRDX1Q06830 199 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 FRG2Q64ET8 278 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 GRHL2Q6ISB3 625 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 HMBOX1Q6NT76 420 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 SPESP1Q6UW49 350 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ERMP1Q7Z2K6 904 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ADGRG5Q8IZF4 528 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ANKFN1Q8N957 763 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 PAPD5Q8NDF8 572 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 DNAJB8Q8NHS0 232 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 WDR20Q8TBZ3 569 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 SLC5A11Q8WWX8 675 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 GTF2H4Q92759 462 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 NEIL2Q969S2 332 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 METTL2AQ96IZ6 378 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 FRG2BQ96QU4 278 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 OR2A14Q96R47 310 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 KCTD14Q9BQ13 255 aaPredicted RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 MRPS30Q9NP92 439 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 POMT2Q9UKY4 750 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 MAN2B2Q9Y2E5 1009 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 ASXL3Q9C0F0 2248 aa14.25□□□□□ -0.13
CAPN3-207ENST00000397200 SNRNP200O75643 2136 aaKnown RBP14.25□□□□□ -0.13
CAPN3-207ENST00000397200 DHRS12A0PJE2 317 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 E7EQ34 232 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 H0YIV9 168 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 FKBP9O95302 570 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 RPLP0P05388 317 aaKnown RBP14.24□□□□□ -0.13
CAPN3-207ENST00000397200 PGRP06401 933 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 GP1BAP07359 652 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 BMP2P12643 396 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 HSD3B1P14060 373 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 ZNF26P17031 533 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-207ENST00000397200 HOXB9P17482 250 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-207ENST00000397200 HSD3B2P26439 372 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 MAPK1P28482 360 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CD1CP29017 333 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CLCN2P51788 898 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 DGKQP52824 942 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 LIMK1P53667 647 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 PPP1CAP62136 330 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CHIT1Q13231 466 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 SLC5A12Q1EHB4 618 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 SGO1Q5FBB7 561 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 MSANTD1Q6ZTZ1 278 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms