RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ATP5A1P25705 553 aaKnown RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 VSX2P58304 361 aaPredicted RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 BTKQ06187 659 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 C3orf38Q5JPI3 329 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 NIPAL1Q6NVV3 410 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 OVCH1Q7RTY7 1134 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 NUDCD3Q8IVD9 361 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 CLYBLQ8N0X4 340 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TMEM52Q8NDY8 209 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TRAF6Q9Y4K3 522 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 OR1F1O43749 312 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 EDF1O60869 148 aaKnown RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 RPS13P62277 151 aaKnown RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 TRA2BP62995 288 aaKnown RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 CYP4F3Q08477 520 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 ASPHQ12797 758 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 EPGNQ6UW88 154 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 MILR1Q7Z6M3 343 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 GBP7Q8N8V2 638 aaPredicted RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 SNX31Q8N9S9 440 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 SLC13A3Q8WWT9 602 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 MACROD1Q9BQ69 325 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 DPH1Q9BZG8 443 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 STARD5Q9NSY2 213 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 C21orf140B9A014 251 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 SDHDO14521 159 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 POLR1CO15160 346 aaPredicted RBP10.02□□□□□ -0.8
NUP98-205ENST00000397007 NDUFS4O43181 175 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 TMPRSS11DO60235 418 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 OR2B3O76000 313 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 PTX3P26022 381 aaPredicted RBP10.02□□□□□ -0.8
NUP98-205ENST00000397007 FOXC1Q12948 553 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 HERC3Q15034 1050 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 REPS1Q96D71 796 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 OR1F2PQ96R84 312 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 RUFY1Q96T51 708 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 WDR77Q9BQA1 342 aaPredicted RBP10.02□□□□□ -0.8
NUP98-205ENST00000397007 TBCDQ9BTW9 1192 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 MID1IP1Q9NPA3 183 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 KLHL3Q9UH77 587 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 ANGPTL2Q9UKU9 493 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 PTGDR2Q9Y5Y4 395 aa10.02□□□□□ -0.8
NUP98-205ENST00000397007 SPTBP11277 2137 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 SOCS6O14544 535 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 PROM1O43490 865 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 ZFAND4Q86XD8 727 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 PLPP5Q8NEB5 264 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.02□□□□□ -0.81
NUP98-205ENST00000397007 SERINC2Q96SA4 455 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 BRINP2Q9C0B6 783 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 SERTAD3Q9UJW9 196 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 DAPP1Q9UN19 280 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 MEN1O00255 615 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 EEDO75530 441 aaKnown RBP10.02□□□□□ -0.81
NUP98-205ENST00000397007 RASSF9O75901 435 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 IL10P22301 178 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 GPR143P51810 404 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 LIM2P55344 173 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 SPRED3Q2MJR0 410 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 AP1ARQ63HQ0 302 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 CLEC6AQ6EIG7 209 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 PROSER1Q86XN7 944 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 TWIST2Q8WVJ9 160 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 SERPINI1Q99574 410 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 NLNQ9BYT8 704 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 TAS2R7Q9NYW3 318 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 MCM8Q9UJA3 840 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 SNX6Q9UNH7 406 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 GMEB1Q9Y692 573 aa10.02□□□□□ -0.81
NUP98-205ENST00000397007 TEX51A0A1B0GUA7 166 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 HIST1H1TP22492 207 aaPredicted RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 GALNSP34059 522 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 NEK2P51955 445 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 HNRNPFP52597 415 aaKnown RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 SOX8P57073 446 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 OR4C11Q6IEV9 310 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 QSOX2Q6ZRP7 698 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 ZNF655Q8N720 491 aaPredicted RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 APIPQ96GX9 242 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 ZNF681Q96N22 645 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 KCNC2Q96PR1 638 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 GPR87Q9BY21 358 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 ACTR5Q9H9F9 607 aaPredicted RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 PISDQ9UG56 409 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 GOLGA6L10A6NI86 522 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 STMND1H3BQB6 276 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 PSMG1O95456 288 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 ALOX12P18054 663 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 MDH1P40925 334 aaKnown RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 HNRNPH2P55795 449 aaKnown RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 FOXK2Q01167 660 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 CT55Q8WUE5 264 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 ANKRD9Q96BM1 317 aaPredicted RBP10.01□□□□□ -0.81
NUP98-205ENST00000397007 F2RL3Q96RI0 385 aa10.01□□□□□ -0.81
NUP98-205ENST00000397007 MAP4K5Q9Y4K4 846 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms