RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 QSOX2Q6ZRP7 698 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF572Q7Z3I7 529 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-206ENST00000395795 CA13Q8N1Q1 262 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 KIF2BQ8N4N8 673 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 BBOF1Q8ND07 529 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 PYROXD1Q8WU10 500 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 ESAMQ96AP7 390 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 QRFPRQ96P65 431 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 AIF1LQ9BQI0 150 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 NECTIN3Q9NQS3 549 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 NSMCE4AQ9NXX6 385 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 ABI3Q9P2A4 366 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF490Q9ULM2 529 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-206ENST00000395795 DYRK1BQ9Y463 629 aa15.18■□□□□ 0.02
CXCL12-206ENST00000395795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
CXCL12-206ENST00000395795 TCRBV16S1A1N1A0A5B0 115 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 B4GALT2O60909 372 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 FAM155BO75949 473 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 SERPIND1P05546 499 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 CD96P40200 585 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 HNF4AP41235 474 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 AP2B1P63010 937 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 E2F2Q14209 437 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 EXT1Q16394 746 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 ADPRMQ3LIE5 342 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF787Q6DD87 383 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 TMEM52Q8NDY8 209 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 TRPV3Q8NET8 790 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 RELTQ969Z4 430 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 MS4A6EQ96DS6 147 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 WDR34Q96EX3 536 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 SCMH1Q96GD3 660 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 CPNE1Q99829 537 aa15.17■□□□□ 0.02
CXCL12-206ENST00000395795 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.17■□□□□ 0.02
CXCL12-206ENST00000395795 CLK4Q9HAZ1 481 aaKnown RBP15.17■□□□□ 0.02
CXCL12-206ENST00000395795 PTBP2Q9UKA9 531 aaKnown RBP15.17■□□□□ 0.02
CXCL12-206ENST00000395795 LRIT2A6NDA9 550 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 NEURL1O76050 574 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 WDR47O94967 919 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 CCDC166P0CW27 439 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 MAOAP21397 527 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 DCTP40126 519 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 GP5P40197 560 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 HNRNPFP52597 415 aaKnown RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 OR4D2P58180 307 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 ETF1P62495 437 aaKnown RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 ELOAQ14241 798 aaKnown RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 SLBPQ14493 270 aaKnown RBP eCLIP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 RBBP5Q15291 538 aaKnown RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 TOR1AIP1Q5JTV8 583 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 CDKL4Q5MAI5 379 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 UBAP2Q5T6F2 1119 aaKnown RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 C3orf62Q6ZUJ4 267 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 ABHD13Q7L211 337 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 SCUBE1Q8IWY4 988 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF354BQ96LW1 612 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 MAGEB10Q96LZ2 347 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 LPAR4Q99677 370 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 EGFL8Q99944 293 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 PHACTR1Q9C0D0 580 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 NT5DC2Q9H857 520 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 KCNK13Q9HB14 408 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF223Q9UK11 482 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-206ENST00000395795 PCDHGB6Q9Y5F9 930 aa15.16■□□□□ 0.02
CXCL12-206ENST00000395795 A0A0G2JN53 185 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 HMX2A2RU54 273 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 ASPDHA6ND91 283 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 NDC80O14777 642 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 SLC35E2BP0CK96 405 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 GNAZP19086 355 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 HSPA7P48741 367 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 GPR143P51810 404 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 EFTUD2Q15029 972 aaKnown RBP eCLIP15.15■□□□□ 0.02
CXCL12-206ENST00000395795 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 ZNF766Q5HY98 468 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 SPINK14Q6IE38 97 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 TMIGD1Q6UXZ0 262 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 UBE3DQ7Z6J8 389 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 ISCA2Q86U28 154 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 LGI4Q8N135 537 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 TBC1D19Q8N5T2 526 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 APCDD1LQ8NCL9 501 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 PDPRQ8NCN5 879 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 KIAA1191Q96A73 305 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 PTCHD1Q96NR3 888 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 EHD1Q9H4M9 534 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 TRIM45Q9H8W5 580 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-206ENST00000395795 IGSF5Q9NSI5 407 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 ANKRD10Q9NXR5 420 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 GPRC5BQ9NZH0 403 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 PPIEQ9UNP9 301 aaKnown RBP15.15■□□□□ 0.02
CXCL12-206ENST00000395795 CACNA1DQ01668 2161 aa15.15■□□□□ 0.02
CXCL12-206ENST00000395795 PABPN1LA6NDY0 278 aaKnown RBP15.14■□□□□ 0.01
CXCL12-206ENST00000395795 SAGE2PA6NJ88 616 aa15.14■□□□□ 0.01
CXCL12-206ENST00000395795 PRMT3O60678 531 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms