RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CCM2Q9BSQ5 444 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 EFCAB11Q9BUY7 163 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 ATG10Q9H0Y0 220 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 SYNDIG1Q9H7V2 258 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 NEK6Q9HC98 313 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 MS4A12Q9NXJ0 267 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 NFKBIL1Q9UBC1 381 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 TMCC3Q9ULS5 477 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 GABRQQ9UN88 632 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 ZNF232Q9UNY5 417 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 PCDHGB2Q9Y5G2 931 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 ENPP4Q9Y6X5 453 aa9.65□□□□□ -0.86
UBE2D3-208ENST00000394803 CENPBD1B2RD01 187 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 NT5C1B-RDH14C9J2C7 533 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 FOXE1O00358 373 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 PRRG1O14668 218 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 IDH3BO43837 385 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TNFRSF21O75509 655 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 PDE9AO76083 593 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ADAP00813 363 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 PTHP01270 115 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 IFNW1P05000 195 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SCG5P05408 212 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 HSMCR30P0CW71 290 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 HLA-EP13747 358 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.879e-8■■■■□ 19.7
UBE2D3-208ENST00000394803 CHI3L1P36222 383 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 XCR1P46094 333 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 OR2B6P58173 313 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SMIM11AP58511 58 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 CDK6Q00534 326 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 LMAN2Q12907 356 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 MED22Q15528 200 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 RNLSQ5VYX0 342 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 C22orf39Q6P5X5 142 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TAS1R1Q7RTX1 841 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 DNAJB7Q7Z6W7 309 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 GALNT10Q86SR1 603 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 NAGSQ8N159 534 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 IL17RCQ8NAC3 791 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC43A3Q8NBI5 491 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 OR56A3Q8NH54 315 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 UBE2E3Q969T4 207 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 WBP2Q969T9 261 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 PPCDCQ96CD2 204 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SLC35A5Q9BS91 424 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ZSCAN5AQ9BUG6 496 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 OR51E2Q9H255 320 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TMEM245Q9H330 911 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SMURF1Q9HCE7 757 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 HS3ST2Q9Y278 367 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 IRGMA1A4Y4 181 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ZAR1LA6NP61 321 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 GRM6O15303 877 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ADAM12O43184 909 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 GPR37L1O60883 481 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ATG13O75143 517 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 C1SP09871 688 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ENDOUP21128 410 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 GTF2E2P29084 291 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 RORCP51449 518 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 CRISP1P54107 249 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 SNRPGP62308 76 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 E2F2Q14209 437 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 C1QTNF12Q5T7M4 302 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 BRAT1Q6PJG6 821 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TMC5Q6UXY8 1006 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TRAM1L1Q8N609 369 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 FBXO15Q8NCQ5 510 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM83FQ8NEG4 500 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 CAPSLQ8WWF8 208 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 RASSF5Q8WWW0 418 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 KLHL6Q8WZ60 621 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TP53INP1Q96A56 240 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 MED8Q96G25 268 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 WDFY2Q96P53 400 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 TEFMQ96QE5 360 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 VPS35Q96QK1 796 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 MND1Q9BWT6 205 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 BBS2Q9BXC9 721 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 FAM83DQ9H4H8 585 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 MYNNQ9NPC7 610 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 STOX2Q9P2F5 926 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 MGAT4BQ9UQ53 548 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
UBE2D3-208ENST00000394803 A8MX80 341 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 E7EQ34 232 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 KMOO15229 486 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 EFEMP2O95967 443 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 RB1P06400 928 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 NUDT7P0C024 238 aa9.63□□□□□ -0.87
UBE2D3-208ENST00000394803 ARAFP10398 606 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms