RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MARK1Q9P0L2 795 aa13.92□□□□□ -0.18
PPARGC1B-203ENST00000394320 ZCWPW2A0A1B0GU75 182 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CPSF4LA6NMK7 179 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ZBTB42B2RXF5 422 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 UGDHO60701 494 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CPNE3O75131 537 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ITGA10O75578 1167 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CA3P07451 260 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 C7P10643 843 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TYRP1P17643 537 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TNFAIP8L3Q5GJ75 292 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 NANOGNBQ7Z5D8 188 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 MEIOBQ8N635 442 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 SLC45A3Q96JT2 553 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ALPK1Q96QP1 1244 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 SLC39A3Q9BRY0 314 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 LGR4Q9BXB1 951 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 PLAGL1Q9UM63 463 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 OPN1SWP03999 348 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 GSTM2P28161 218 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 GNALP38405 381 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CBX5P45973 191 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 KDELC1Q6UW63 502 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 C6orf89Q6UWU4 347 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ARMCX6Q7L4S7 300 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ZNF598Q86UK7 904 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CEP97Q8IW35 865 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 BHLHE41Q9C0J9 482 aaPredicted RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 A8MUA0 341 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 K7ERQ8 282 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 SOCS7O14512 581 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 EMC8O43402 210 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 GMFGO60234 142 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 BCKDHAP12694 445 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 ITGB7P26010 798 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 SLC6A6P31641 620 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 PDX1P52945 283 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CASP9P55211 416 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 PITPNAQ00169 270 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TMEM234Q8WY98 164 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 CTPS2Q9NRF8 586 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 TNFRSF10DQ9UBN6 386 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
PPARGC1B-203ENST00000394320 IDH3BO43837 385 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 FHP07954 510 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 CDKN2DP55273 166 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 CLDN8P56748 225 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PPP2R2BQ00005 443 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 MOGSQ13724 837 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 DOC2AQ14183 400 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 NPTX1Q15818 432 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 MAPK14Q16539 360 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 SGCBQ16585 318 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PARP8Q8N3A8 854 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 OSTF1Q92882 214 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 GPR174Q9BXC1 333 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PELI2Q9HAT8 420 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 POLE3Q9NRF9 147 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 KLRF1Q9NZS2 232 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PCDHB3Q9Y5E6 796 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 LAMTOR5O43504 91 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 EEDO75530 441 aaKnown RBP13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PDYNP01213 254 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 JUNDP17535 347 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 CD9P21926 228 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 ARCN1P48444 511 aaKnown RBP13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 DIO3P55073 304 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 RAB15P59190 212 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PON3Q15166 354 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PCBP2Q15366 365 aaKnown RBP eCLIP13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 RABL3Q5HYI8 236 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 NANOGP8Q6NSW7 305 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 ALKAL1Q6UXT8 129 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 RNF130Q86XS8 419 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 SLC22A15Q8IZD6 547 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 FAR1Q8WVX9 515 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 STON2Q8WXE9 905 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 HAVCR1Q96D42 359 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 NANOGQ9H9S0 305 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 FBRSL1Q9HCM7 1045 aaKnown RBP13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 UPB1Q9UBR1 384 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 GPR34Q9UPC5 381 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 BTN3A3O00478 584 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 SEMA4FO95754 770 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 CD68P34810 354 aaPredicted RBP13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 TIGD6Q17RP2 521 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 MINDY1Q8N5J2 469 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 MKL2Q9ULH7 1088 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 TP53I11O14683 189 aa13.9□□□□□ -0.18
PPARGC1B-203ENST00000394320 PLOD3O60568 738 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms