RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SCARB2Q14108 478 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 FAM71E1Q6IPT2 247 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 NXPE4Q6UWF7 544 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 ZNF765Q7L2R6 523 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TMCO5AQ8N6Q1 288 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 LMNTD1Q8N9Z9 388 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 NDNFQ8TB73 568 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 CIDECQ96AQ7 238 aaPredicted RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 NUS1Q96E22 293 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 SPNS1Q9H2V7 528 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 OR51B5Q9H339 312 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TMEM38AQ9H6F2 299 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 RNF6Q9Y252 685 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 ZNF451Q9Y4E5 1061 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 K7ESM1 405 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 SAP18O00422 153 aaKnown RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 KLHL18O94889 574 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 PRNPP04156 253 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 ADH5P11766 374 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TNFRSF1BP20333 461 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 PTX3P26022 381 aaPredicted RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 GGT2P36268 569 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 PXNP49023 591 aaPredicted RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 METAP1P53582 386 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 CASP9P55211 416 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 FADDQ13158 208 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 ITGADQ13349 1161 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 PPIGQ13427 754 aaKnown RBP eCLIP11.8□□□□□ -0.523e-8■■■■■ 37.3
RFC5-201ENST00000392542 DGCR6Q14129 220 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 DGUOKQ16854 277 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 MPEG1Q2M385 716 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 RGS21Q2M5E4 152 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 RAET1GQ6H3X3 334 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 AHSA2Q719I0 299 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 CCDC80Q76M96 950 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
RFC5-201ENST00000392542 METTL4Q8N3J2 472 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 OXR1Q8N573 874 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 OR10G2Q8NGC3 310 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 OR4C15Q8NGM1 316 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 NFKBIDQ8NI38 313 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 DNASE1L2Q92874 299 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TAMM41Q96BW9 452 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 KCNC2Q96PR1 638 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 WDR12Q9GZL7 423 aaKnown RBP11.8□□□□□ -0.52
RFC5-201ENST00000392542 HMG20AQ9NP66 347 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 AKIP1Q9NQ31 210 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 C1GALT1Q9NS00 363 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 TMEM184CQ9NVA4 438 aa11.8□□□□□ -0.52
RFC5-201ENST00000392542 OR2A25A4D2G3 310 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 CEBPBP17676 345 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 GPR1P46091 355 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 PSMD7P51665 324 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 TAS2R50P59544 299 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 VBP1P61758 197 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 LSM3P62310 102 aaKnown RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 MEF2AQ02078 507 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 ATP1A4Q13733 1029 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 TCEAL5Q5H9L2 206 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 UBE2UQ5VVX9 321 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 TRIM40Q6P9F5 258 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 C12orf40Q86WS4 652 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 P3H2Q8IVL5 708 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ING5Q8WYH8 240 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ARRDC3Q96B67 414 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 MTERF3Q96E29 417 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 FEVQ99581 238 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 CCDC177Q9NQR7 707 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 THSD1Q9NS62 852 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 SPASTQ9UBP0 616 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ACSL6Q9UKU0 697 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 KIAA0355O15063 1070 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 PAPLNO95428 1278 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 VIPP01282 170 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ANXA8P13928 327 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ITGB7P26010 798 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ALDH4A1P30038 563 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 SERPINB10P48595 397 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 PRIM2P49643 509 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 SPIBQ01892 262 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 EEF1A2Q05639 463 aaKnown RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 ELP6Q0PNE2 266 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 IER5LQ5T953 404 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 Q6ZPB1 254 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 SLC5A8Q8N695 610 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 DYNC2LI1Q8TCX1 351 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 S100ZQ8WXG8 99 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 UBE2E3Q969T4 207 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 ZNF514Q96K75 400 aaPredicted RBP11.79□□□□□ -0.52
RFC5-201ENST00000392542 TRIM39Q9HCM9 518 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 PLCXD1Q9NUJ7 323 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 POFUT2Q9Y2G5 429 aa11.79□□□□□ -0.52
RFC5-201ENST00000392542 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms