RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TBC1D21Q8IYX1 336 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 SLC22A15Q8IZD6 547 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 PLA2G15Q8NCC3 412 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 OR52B2Q96RD2 323 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 SPOCK3Q9BQ16 436 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 A0A1B0GTL3 188 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 IGLON5A6NGN9 336 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 PLD2O14939 933 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 SUPT7LO94864 414 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 ITGA2P17301 1181 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 MRPL28Q13084 256 aaKnown RBP18.27■□□□□ 0.51
CCDC50-202ENST00000392456 ADPRMQ3LIE5 342 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM52BQ4KMG9 183 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 FAM46CQ5VWP2 391 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 SBSNQ6UWP8 590 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 CDH24Q86UP0 819 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 MICU2Q8IYU8 434 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 DHRSXQ8N5I4 330 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 RASGEF1AQ8N9B8 481 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 GLB1L3Q8NCI6 653 aaPredicted RBP18.27■□□□□ 0.51
CCDC50-202ENST00000392456 MUL1Q969V5 352 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 GABRG3Q99928 467 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 ILKAPQ9H0C8 392 aaPredicted RBP18.27■□□□□ 0.51
CCDC50-202ENST00000392456 PCDHAC1Q9H158 963 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 TM9SF3Q9HD45 589 aa18.27■□□□□ 0.51
CCDC50-202ENST00000392456 MRPS7Q9Y2R9 242 aaKnown RBP18.27■□□□□ 0.51
CCDC50-202ENST00000392456 LINC00862A6NCI5 91 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 H2AFYO75367 372 aaKnown RBP18.26■□□□□ 0.51
CCDC50-202ENST00000392456 TRAPPC2P0DI81 140 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 TRAPPC2BP0DI82 140 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 CD83Q01151 205 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 ZNF267Q14586 743 aaPredicted RBP18.26■□□□□ 0.51
CCDC50-202ENST00000392456 SEL1L3Q68CR1 1132 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 LILRA3Q8N6C8 439 aaPredicted RBP18.26■□□□□ 0.51
CCDC50-202ENST00000392456 NUS1Q96E22 293 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PDLIM5Q96HC4 596 aaKnown RBP18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PIP5K1AQ99755 562 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 SEC22CQ9BRL7 303 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 OR51B5Q9H339 312 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 RAP2CQ9Y3L5 183 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PPM1BO75688 479 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 HERVK_113P63132 956 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 BNC1Q01954 994 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 CYBRD1Q53TN4 286 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PAGE2Q7Z2X7 111 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 NRSN1Q8IZ57 195 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 NLGN4XQ8N0W4 816 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 ERVK-6Q9BXR3 956 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 UCK2Q9BZX2 261 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 ADGRE2Q9UHX3 823 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PCOLCE2Q9UKZ9 415 aa18.26■□□□□ 0.51
CCDC50-202ENST00000392456 PRR23AA6NEV1 266 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 GRID2O43424 1007 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 PCDH8O95206 1070 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 HOXB2P14652 356 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 IL10P22301 178 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 AOAHP28039 575 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 NFKB2Q00653 900 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 TEKQ02763 1124 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 TMEM115Q12893 351 aaPredicted RBP18.25■□□□□ 0.51
CCDC50-202ENST00000392456 RAET1GQ6H3X3 334 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 TMPRSS9Q7Z410 1059 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 GPSM1Q86YR5 675 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 SLC22A9Q8IVM8 553 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 CXorf40AQ8TE69 158 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 KLK6Q92876 244 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 CCDC126Q96EE4 140 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 SLIRPQ9GZT3 109 aaKnown RBP18.25■□□□□ 0.51
CCDC50-202ENST00000392456 NECTIN3Q9NQS3 549 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 CSNK1G3Q9Y6M4 447 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 HMX3A6NHT5 357 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 NPHS1O60500 1241 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 OR56A5P0C7T3 313 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 MSH3P20585 1137 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 ELK4P28324 431 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 RPL14P50914 215 aaKnown RBP18.25■□□□□ 0.51
CCDC50-202ENST00000392456 MLLT1Q03111 559 aaPredicted RBP18.25■□□□□ 0.51
CCDC50-202ENST00000392456 TFF2Q03403 129 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 BOP1Q14137 746 aaKnown RBP18.25■□□□□ 0.51
CCDC50-202ENST00000392456 PLCL1Q15111 1095 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 ATP6AP1Q15904 470 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 FBXO39Q8N4B4 442 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 ZBTB44Q8NCP5 570 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 ST8SIA2Q92186 375 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 L3HYPDHQ96EM0 354 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 LATS2Q9NRM7 1088 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 GPRC5BQ9NZH0 403 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 FIS1Q9Y3D6 152 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 GRIP1Q9Y3R0 1128 aa18.25■□□□□ 0.51
CCDC50-202ENST00000392456 I3L521 148 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 C5AR1P21730 350 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 BAMBIQ13145 260 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 ART3Q13508 389 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 PLCZ1Q86YW0 608 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 OR52H1Q8NGJ2 320 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 GUCD1Q96NT3 240 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 BDH2Q9BUT1 245 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 PPA2Q9H2U2 334 aa18.24■□□□□ 0.51
CCDC50-202ENST00000392456 WDR55Q9H6Y2 383 aaPredicted RBP18.24■□□□□ 0.51
CCDC50-202ENST00000392456 CYB5R1Q9UHQ9 305 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms