RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PAPD5Q8NDF8 572 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 C16orf70Q9BSU1 422 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SLC39A1Q9NY26 324 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 STUB1Q9UNE7 303 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 RCBTB2O95199 551 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 STSP08842 583 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 CLK3P49761 638 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SLC36A3Q495N2 470 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 LINGO4Q6UY18 593 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SNX29P2Q8IUI4 249 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 ZDHHC4Q9NPG8 344 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 TAS2R3Q9NYW6 316 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 AGAP5A6NIR3 686 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 WRBO00258 174 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 CACNB4O00305 520 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-203ENST00000391813 MAGEA12P43365 314 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 TCEAL4Q96EI5 215 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 VRTNQ9H8Y1 702 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 MGAT4AQ9UM21 535 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 ZFP37Q9Y6Q3 630 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-203ENST00000391813 CLCA1A8K7I4 914 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 NPR2P20594 1047 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 PON2Q15165 354 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 CLEC12AQ5QGZ9 265 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 UBE2UQ5VVX9 321 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 NFKBIDQ8NI38 313 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 FATE1Q969F0 183 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 DOHHQ9BU89 302 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 MKRN2Q9H000 416 aaKnown RBP19.03■□□□□ 0.64
SHANK1-203ENST00000391813 VILLO15195 856 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 ZNF865P0CJ78 1059 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-203ENST00000391813 CD1DP15813 335 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 BAIAP2L2Q6UXY1 529 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 C15orf39Q6ZRI6 1047 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 ANKLE1Q8NAG6 615 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 ZMIZ2Q8NF64 920 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 S100A16Q96FQ6 103 aaKnown RBP19.03■□□□□ 0.64
SHANK1-203ENST00000391813 FAM129BQ96TA1 746 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 SORT1Q99523 831 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 NEUROD4Q9HD90 331 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 PCDH10Q9P2E7 1040 aa19.03■□□□□ 0.64
SHANK1-203ENST00000391813 GRXCR2A6NFK2 248 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 OR2AG2A6NM03 316 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 TRIM3O75382 744 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 SORBS2O94875 1100 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 CYBAP13498 195 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 RPL17P18621 184 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 FUT4P22083 530 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 RORAP35398 523 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 NRIP1P48552 1158 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 ST3GAL3Q11203 375 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 FAM182AQ5T1J6 154 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 DENND6BQ8NEG7 585 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 TBX5Q99593 518 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 RSPH9Q9H1X1 276 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 RNF121Q9H920 327 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 YIPF1Q9Y548 306 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 PPEF2O14830 753 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 ZNF3P17036 446 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 TRAM1Q15629 374 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 LIPKQ5VXJ0 399 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 SLC30A6Q6NXT4 461 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 CARM1Q86X55 608 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 GPER1Q99527 375 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 DPCDQ9BVM2 203 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 TLR9Q9NR96 1032 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 CTPS2Q9NRF8 586 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 ZDHHC3Q9NYG2 299 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 MRTO4Q9UKD2 239 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 DISC1C4P0D8 188 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 POP4O95707 220 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 APOC3P02656 99 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 MORN1Q5T089 497 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 ARMC10Q8N2F6 343 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 TSNAXQ99598 290 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 NSUN3Q9H649 340 aaKnown RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 SDR39U1Q9NRG7 319 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-203ENST00000391813 ERVW-1Q9UQF0 538 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 DNAJC15Q9Y5T4 150 aa19.02■□□□□ 0.64
SHANK1-203ENST00000391813 SCN2BO60939 215 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 MT-ND5P03915 603 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 ACVR2AP27037 513 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 ERVK-21P61565 698 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 SEC23BQ15437 767 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 TBC1D25Q3MII6 688 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 PIWIL3Q7Z3Z3 882 aaKnown RBP19.02■□□□□ 0.63
SHANK1-203ENST00000391813 SAMD12Q8N8I0 201 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 COQ8AQ8NI60 647 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 ZFP90Q8TF47 636 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 SCGB3A2Q96PL1 93 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 IL23AQ9NPF7 189 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 PCDHGA4Q9Y5G9 962 aa19.02■□□□□ 0.63
SHANK1-203ENST00000391813 GADD45AP24522 165 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 CDK5R2Q13319 367 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 ARL14EPQ8N8R7 260 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-203ENST00000391813 PSD4Q8NDX1 1056 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 PYCR2Q96C36 320 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF285Q96NJ3 590 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 KXD1Q9BQD3 176 aa19.01■□□□□ 0.63
SHANK1-203ENST00000391813 MINDY3Q9H8M7 445 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms